RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 ENTPD2Q9Y5L3 495 aa13.35□□□□□ -0.27
CLNS1A-207ENST00000527133 HEMK1Q9Y5R4 338 aaPredicted RBP13.35□□□□□ -0.27
CLNS1A-207ENST00000527133 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 A6NNZ2 444 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 PCDH8O95206 1070 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 TRUB2O95900 331 aaKnown RBP13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 PITX1P78337 314 aaPredicted RBP13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 CLN3Q13286 438 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 ZNF177Q13360 481 aaPredicted RBP13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 ZCCHC8Q6NZY4 707 aaKnown RBP13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 CRTC1Q6UUV9 634 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 RBM44Q6ZP01 1051 aaKnown RBP13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 BEND5Q7L4P6 421 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 PPM1KQ8N3J5 372 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 SH2D3CQ8N5H7 860 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 ZNF548Q8NEK5 533 aaPredicted RBP13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 KAT5Q92993 513 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 RNF34Q969K3 372 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 RPRD1AQ96P16 312 aaPredicted RBP13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 NT5C1BQ96P26 610 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 PPP1R9BQ96SB3 815 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 TRIM62Q9BVG3 475 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 DYRK4Q9NR20 520 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 SLC12A6Q9UHW9 1150 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 VPS28Q9UK41 221 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 ZFR2Q9UPR6 939 aaKnown RBP13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 PCDHGA8Q9Y5G5 932 aa13.34□□□□□ -0.27
CLNS1A-207ENST00000527133 SYNJ2BP-COX16A0A087WUM0 186 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 CDRT15L2A8MXV6 281 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 SLC16A3O15427 465 aaKnown RBP13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 TNFSF15O95150 251 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 IGLV3-25P01717 112 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 CHRNA3P32297 505 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 IRAK1P51617 712 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 CCDC15Q0P6D6 951 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 PKP1Q13835 747 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 FZD2Q14332 565 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 DEFB133Q30KQ1 61 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 C6orf132Q5T0Z8 1188 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 FBXL22Q6P050 247 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 ARL14Q8N4G2 192 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 EXD3Q8N9H8 876 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 SLC35C1Q96A29 364 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 GRAMD1AQ96CP6 724 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 FAM204AQ9H8W3 233 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 POPDC2Q9HBU9 364 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 COX16Q9P0S2 106 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 IL17BQ9UHF5 180 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 FARP1Q9Y4F1 1045 aaPredicted RBP13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 OR51B4Q9Y5P0 310 aa13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 COL27A1Q8IZC6 1860 aaPredicted RBP13.33□□□□□ -0.28
CLNS1A-207ENST00000527133 POM121BA6NF01 834 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 H3BM21 787 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 RNF103O00237 685 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 CASC3O15234 703 aaKnown RBP13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 MT-CO1P00395 513 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 CSF2P04141 144 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 SRCP12931 536 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 NME1P15531 152 aaKnown RBP13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 GPD2P43304 727 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 ACADSBP45954 432 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 RPL34P49207 117 aaKnown RBP13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 YWHAZP63104 245 aaKnown RBP13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 DRAP1Q14919 205 aaPredicted RBP13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 NR0B2Q15466 257 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 KIF26BQ2KJY2 2108 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 ARL13BQ3SXY8 428 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 TMEM259Q4ZIN3 620 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 DENND1BQ6P3S1 775 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 KRBA2Q6ZNG9 492 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 ERN2Q76MJ5 926 aaKnown RBP13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 PARGQ86W56 976 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 DCP2Q8IU60 420 aaKnown RBP13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 ATP11CQ8NB49 1132 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 OR2A12Q8NGT7 310 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 WDR36Q8NI36 951 aaKnown RBP13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 GRIN3AQ8TCU5 1115 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 BMFQ96LC9 184 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 CCDC114Q96M63 670 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 CCNL2Q96S94 520 aaPredicted RBP13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 TSG101Q99816 390 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 MUC3BQ9H195 1237 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 NCKIPSDQ9NZQ3 722 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 ARMCX3Q9UH62 379 aaPredicted RBP13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 VANGL2Q9ULK5 521 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 FLNCQ14315 2725 aa13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 TLN1Q9Y490 2541 aaKnown RBP13.32□□□□□ -0.28
CLNS1A-207ENST00000527133 EME2A4GXA9 379 aaPredicted RBP13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 E5RJQ4 531 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 K7ERQ8 282 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 MUSKO15146 869 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 RAD51BO15315 384 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 AQP9O43315 295 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 SNAP91O60641 907 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 SLC2A3P11169 496 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 CCR1P32246 355 aa13.31□□□□□ -0.28
CLNS1A-207ENST00000527133 GGCXP38435 758 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms