RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 HLA-DQB2P05538 268 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 HOXD9P28356 352 aaPredicted RBP20.9■□□□□ 0.94
SMCO4-203ENST00000526869 MMP13P45452 471 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 GEMP55040 296 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 KCNC3Q14003 757 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 SLC5A9Q2M3M2 681 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 FAM182AQ5T1J6 154 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 SYCP2LQ5T4T6 812 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 MARC1Q5VT66 337 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 CXorf57Q6NSI4 855 aaKnown RBP20.9■□□□□ 0.94
SMCO4-203ENST00000526869 LINC00523Q86TU6 105 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 RBM23Q86U06 439 aaKnown RBP20.9■□□□□ 0.94
SMCO4-203ENST00000526869 CCNJLQ8IV13 435 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 ANKMY2Q8IV38 441 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 PALM2Q8IXS6 379 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 KIAA1958Q8N8K9 716 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 USP33Q8TEY7 942 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 GDPD5Q8WTR4 605 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 ARL8AQ96BM9 186 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 TMA16Q96EY4 203 aaKnown RBP20.9■□□□□ 0.94
SMCO4-203ENST00000526869 SIGLEC10Q96LC7 697 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 MLPHQ9BV36 600 aaPredicted RBP20.9■□□□□ 0.94
SMCO4-203ENST00000526869 ACE2Q9BYF1 805 aaPredicted RBP20.9■□□□□ 0.94
SMCO4-203ENST00000526869 SLC25A51Q9H1U9 297 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 VPS37BQ9H9H4 285 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 NOTCH4Q99466 2003 aa20.9■□□□□ 0.94
SMCO4-203ENST00000526869 TRANK1O15050 2925 aa20.89■□□□□ 0.94
SMCO4-203ENST00000526869 TRDMT1O14717 391 aaKnown RBP20.89■□□□□ 0.93
SMCO4-203ENST00000526869 RASGRF2O14827 1237 aa20.89■□□□□ 0.93
SMCO4-203ENST00000526869 KDELR3O43731 214 aa20.89■□□□□ 0.93
SMCO4-203ENST00000526869 TBL1XO60907 577 aa20.89■□□□□ 0.93
SMCO4-203ENST00000526869 BANF1O75531 89 aa20.89■□□□□ 0.93
SMCO4-203ENST00000526869 LUC7L3O95232 432 aaKnown RBP20.89■□□□□ 0.93
SMCO4-203ENST00000526869 ACVRL1P37023 503 aa20.89■□□□□ 0.93
SMCO4-203ENST00000526869 NRIP1P48552 1158 aa20.89■□□□□ 0.93
SMCO4-203ENST00000526869 GPX6P59796 221 aa20.89■□□□□ 0.93
SMCO4-203ENST00000526869 RFTN1Q14699 578 aaPredicted RBP20.89■□□□□ 0.93
SMCO4-203ENST00000526869 MPPE1Q53F39 396 aa20.89■□□□□ 0.93
SMCO4-203ENST00000526869 TTMPQ5BVD1 217 aa20.89■□□□□ 0.93
SMCO4-203ENST00000526869 NAPEPLDQ6IQ20 393 aa20.89■□□□□ 0.93
SMCO4-203ENST00000526869 GRASPQ7Z6J2 395 aaPredicted RBP20.89■□□□□ 0.93
SMCO4-203ENST00000526869 ZNF354CQ86Y25 554 aa20.89■□□□□ 0.93
SMCO4-203ENST00000526869 RIBC1Q8N443 379 aaPredicted RBP20.89■□□□□ 0.93
SMCO4-203ENST00000526869 UHMK1Q8TAS1 419 aaKnown RBP20.89■□□□□ 0.93
SMCO4-203ENST00000526869 SH3RF2Q8TEC5 729 aa20.89■□□□□ 0.93
SMCO4-203ENST00000526869 SMG7Q92540 1137 aaKnown RBP20.89■□□□□ 0.93
SMCO4-203ENST00000526869 MRPL38Q96DV4 380 aaKnown RBP20.89■□□□□ 0.93
SMCO4-203ENST00000526869 ZNF419Q96HQ0 510 aaPredicted RBP20.89■□□□□ 0.93
SMCO4-203ENST00000526869 NAT9Q9BTE0 207 aa20.89■□□□□ 0.93
SMCO4-203ENST00000526869 STMN4Q9H169 189 aaPredicted RBP20.89■□□□□ 0.93
SMCO4-203ENST00000526869 CASS4Q9NQ75 786 aa20.89■□□□□ 0.93
SMCO4-203ENST00000526869 CHMP2BQ9UQN3 213 aa20.89■□□□□ 0.93
SMCO4-203ENST00000526869 LAMA2P24043 3122 aaKnown RBP20.89■□□□□ 0.93
SMCO4-203ENST00000526869 AVILO75366 819 aa20.88■□□□□ 0.93
SMCO4-203ENST00000526869 CPP00450 1065 aa20.88■□□□□ 0.93
SMCO4-203ENST00000526869 OXCT1P55809 520 aa20.88■□□□□ 0.93
SMCO4-203ENST00000526869 USP4Q13107 963 aa20.88■□□□□ 0.93
SMCO4-203ENST00000526869 LBRQ14739 615 aaKnown RBP20.88■□□□□ 0.93
SMCO4-203ENST00000526869 RASA2Q15283 850 aa20.88■□□□□ 0.93
SMCO4-203ENST00000526869 ARMC3Q5W041 872 aa20.88■□□□□ 0.93
SMCO4-203ENST00000526869 TDRPQ86YL5 185 aa20.88■□□□□ 0.93
SMCO4-203ENST00000526869 BBS7Q8IWZ6 715 aa20.88■□□□□ 0.93
SMCO4-203ENST00000526869 AGGF1Q8N302 714 aaeCLIP20.88■□□□□ 0.93
SMCO4-203ENST00000526869 TDRD5Q8NAT2 981 aaKnown RBP20.88■□□□□ 0.93
SMCO4-203ENST00000526869 OXNAD1Q96HP4 312 aaPredicted RBP20.88■□□□□ 0.93
SMCO4-203ENST00000526869 EBNA1BP2Q99848 306 aaKnown RBP20.88■□□□□ 0.93
SMCO4-203ENST00000526869 ACSS3Q9H6R3 686 aa20.88■□□□□ 0.93
SMCO4-203ENST00000526869 PIDD1Q9HB75 910 aa20.88■□□□□ 0.93
SMCO4-203ENST00000526869 TDP1Q9NUW8 608 aa20.88■□□□□ 0.93
SMCO4-203ENST00000526869 MRPS23Q9Y3D9 190 aaKnown RBP20.88■□□□□ 0.93
SMCO4-203ENST00000526869 MYO18AQ92614 2054 aaKnown RBP20.88■□□□□ 0.93
SMCO4-203ENST00000526869 EPOPA6NHQ4 379 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 SDR42E2A6NKP2 422 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 F5H423 210 aaPredicted RBP20.87■□□□□ 0.93
SMCO4-203ENST00000526869 GRIA1P42261 906 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 NTHL1P78549 312 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 SLC10A7Q0GE19 358 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 MPP3Q13368 585 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 SLC14A2Q15849 920 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 KLHL38Q2WGJ6 581 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 HP1BP3Q5SSJ5 553 aaPredicted RBP20.87■□□□□ 0.93
SMCO4-203ENST00000526869 ZNF697Q5TEC3 545 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 STEAP4Q687X5 459 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 OTOP3Q7RTS5 596 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 IGDCC3Q8IVU1 814 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 TDHQ8IZJ6 230 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 BBS5Q8N3I7 341 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 OR7D4Q8NG98 312 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 OR52K2Q8NGK3 314 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 USP13Q92995 863 aaPredicted RBP20.87■□□□□ 0.93
SMCO4-203ENST00000526869 PABPC5Q96DU9 382 aaKnown RBP20.87■□□□□ 0.93
SMCO4-203ENST00000526869 IMP4Q96G21 291 aaKnown RBP20.87■□□□□ 0.93
SMCO4-203ENST00000526869 KIF9Q9HAQ2 790 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 ATP13A1Q9HD20 1204 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 VPS45Q9NRW7 570 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 ZC3H7BQ9UGR2 993 aaKnown RBP20.87■□□□□ 0.93
SMCO4-203ENST00000526869 LGALS13Q9UHV8 139 aa20.87■□□□□ 0.93
SMCO4-203ENST00000526869 MYO7AQ13402 2215 aa20.86■□□□□ 0.93
SMCO4-203ENST00000526869 A0A0D9SEW6 157 aa20.86■□□□□ 0.93
SMCO4-203ENST00000526869 CEBPBP17676 345 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms