RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 UCMAQ8WVF2 138 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 RFFLQ8WZ73 363 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 SLC9A6Q92581 669 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 TBC1D5Q92609 795 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 PDLIM2Q96JY6 352 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 PPP1R10Q96QC0 940 aaKnown RBP5.1□□□□□ -1.59
CD44-220ENST00000525688 AGXT2Q9BYV1 514 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 ARHGAP39Q9C0H5 1083 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 PREBQ9HCU5 417 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 FOXJ2Q9P0K8 574 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 MTRRQ9UBK8 725 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 TBX20Q9UMR3 447 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 RRP15Q9Y3B9 282 aaKnown RBP5.1□□□□□ -1.59
CD44-220ENST00000525688 PCDHB2Q9Y5E7 798 aa5.1□□□□□ -1.59
CD44-220ENST00000525688 MYO5BQ9ULV0 1848 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 RIMS2Q9UQ26 1411 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 PLEKHG1Q9ULL1 1385 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 SOS1Q07889 1333 aaPredicted RBP5.09□□□□□ -1.59
CD44-220ENST00000525688 PGPEP1LA6NFU8 196 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 AGAP5A6NIR3 686 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 LINC00473A8K010 186 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 GCOM1H8Y6P7 765 aaPredicted RBP5.09□□□□□ -1.59
CD44-220ENST00000525688 INO80B-WBP1J3KQ70 363 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 QSOX1O00391 747 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 USO1O60763 962 aaKnown RBP5.09□□□□□ -1.59
CD44-220ENST00000525688 HSPA4LO95757 839 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 ALDOAP04075 364 aaKnown RBP5.09□□□□□ -1.59
CD44-220ENST00000525688 APOA4P06727 396 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 ELFN1P0C7U0 828 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 DESP17661 470 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 PSMC2P35998 433 aaKnown RBP5.09□□□□□ -1.59
CD44-220ENST00000525688 TAS2R50P59544 299 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 UBXN2AP68543 259 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 RAE1P78406 368 aaKnown RBP5.09□□□□□ -1.59
CD44-220ENST00000525688 RNASELQ05823 741 aaKnown RBP5.09□□□□□ -1.59
CD44-220ENST00000525688 FOXI1Q12951 378 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 THOC5Q13769 683 aaKnown RBP5.09□□□□□ -1.59
CD44-220ENST00000525688 PPP2R5BQ15173 497 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 BAK1Q16611 211 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 TMEM88Q6PEY1 159 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 MFSD6Q6ZSS7 791 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 GALNTL5Q7Z4T8 443 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.09□□□□□ -1.59
CD44-220ENST00000525688 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.09□□□□□ -1.59
CD44-220ENST00000525688 LAS2Q8IYD9 372 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 LILRB1Q8NHL6 650 aaPredicted RBP5.09□□□□□ -1.59
CD44-220ENST00000525688 ACTRT2Q8TDY3 377 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 ST8SIA4Q92187 359 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 JAKMIP2Q96AA8 810 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 ARRDC3Q96B67 414 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 RRP36Q96EU6 259 aaKnown RBP5.09□□□□□ -1.59
CD44-220ENST00000525688 DESI2Q9BSY9 194 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 HERC2P3Q9BVR0 1158 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 ELOVL1Q9BW60 279 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 PAIP1Q9H074 479 aaKnown RBP5.09□□□□□ -1.59
CD44-220ENST00000525688 RMI1Q9H9A7 625 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 USP29Q9HBJ7 922 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 DIAPH3Q9NSV4 1193 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 COMMD8Q9NX08 183 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 LRIT1Q9P2V4 623 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 BLOC1S6Q9UL45 172 aa5.09□□□□□ -1.59
CD44-220ENST00000525688 IQSEC2Q5JU85 1478 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 SALL3Q9BXA9 1300 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 C17orf113A0A1B0GUU1 675 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 A0A1W2PPH5 198 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 GRID2IPA4D2P6 1211 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 H3BNC9 293 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 KLK10O43240 276 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 DOK2O60496 412 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 B3GALNT1O75752 331 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 SLC3A2P08195 630 aaKnown RBP5.08□□□□□ -1.6
CD44-220ENST00000525688 CSF1P09603 554 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 ACP5P13686 325 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 APEHP13798 732 aaKnown RBP5.08□□□□□ -1.6
CD44-220ENST00000525688 STMN1P16949 149 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 SFPQP23246 707 aaKnown RBP eCLIP5.08□□□□□ -1.6
CD44-220ENST00000525688 FPR3P25089 353 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 TNNT3P45378 269 aaPredicted RBP5.08□□□□□ -1.6
CD44-220ENST00000525688 TPD52P55327 224 aaPredicted RBP5.08□□□□□ -1.6
CD44-220ENST00000525688 IFT88Q13099 833 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 ZNF169Q14929 603 aaPredicted RBP5.08□□□□□ -1.6
CD44-220ENST00000525688 ERCC6LQ2NKX8 1250 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 LRRC24Q50LG9 513 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 HSP90AB3PQ58FF7 597 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 SLC9C2Q5TAH2 1124 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 LIPMQ5VYY2 423 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 SLC30A6Q6NXT4 461 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 KIRREL2Q6UWL6 708 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 KYAT3Q6YP21 454 aaKnown RBP5.08□□□□□ -1.6
CD44-220ENST00000525688 LRRC8DQ7L1W4 858 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 ZNF804AQ7Z570 1209 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 SPRED1Q7Z699 444 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 ANKRD44Q8N8A2 993 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 NAT8LQ8N9F0 302 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 MIGA1Q8NAN2 632 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 SRFBP1Q8NEF9 429 aaKnown RBP5.08□□□□□ -1.6
CD44-220ENST00000525688 LINS1Q8NG48 757 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 CLEC4CQ8WTT0 213 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 ATP2A3Q93084 1043 aa5.08□□□□□ -1.6
CD44-220ENST00000525688 SLF1Q9BQI6 1058 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms