RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 AIFM3Q96NN9 605 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 SDF4Q9BRK5 362 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 GKN1Q9NS71 199 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 Q9UFV3 132 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 INSL5Q9Y5Q6 135 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 UBIAD1Q9Y5Z9 338 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 MYLKQ15746 1914 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 CCDC168Q8NDH2 2452 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 KNG1P01042 644 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 KRT18P05783 430 aaKnown RBP7.51□□□□□ -1.21
NEDD8-203ENST00000524927 MLH1P40692 756 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 SCNN1GP51170 649 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 MGAT5Q09328 741 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 ADRM1Q16186 407 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 FHL5Q5TD97 284 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 ABHD15Q6UXT9 468 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 CATSPER4Q7RTX7 472 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 DGKHQ86XP1 1220 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 GLB1L2Q8IW92 636 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 LRRC71Q8N4P6 559 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 PIGOQ8TEQ8 1089 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 CD101Q93033 1021 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 ADI1Q9BV57 179 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 LY9Q9HBG7 655 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 IL1RAPL2Q9NP60 686 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 ANLNQ9NQW6 1124 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 ZNF302Q9NR11 478 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 AGPAT5Q9NUQ2 364 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 MIOSQ9NXC5 875 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 DNAI1Q9UI46 699 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 ANAPC2Q9UJX6 822 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 NFE2L3Q9Y4A8 694 aa7.51□□□□□ -1.21
NEDD8-203ENST00000524927 ATRQ13535 2644 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 MYO16Q9Y6X6 1858 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 A1L4Q6 167 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 IPO5O00410 1097 aaKnown RBP7.5□□□□□ -1.21
NEDD8-203ENST00000524927 RNF113AO15541 343 aaKnown RBP7.5□□□□□ -1.21
NEDD8-203ENST00000524927 PLA2G1BP04054 148 aaKnown RBP7.5□□□□□ -1.21
NEDD8-203ENST00000524927 ZFYP08048 801 aaPredicted RBP7.5□□□□□ -1.21
NEDD8-203ENST00000524927 PARP1P09874 1014 aaKnown RBP7.5□□□□□ -1.21
NEDD8-203ENST00000524927 HNRNPLP14866 589 aaKnown RBP eCLIP7.5□□□□□ -1.21
NEDD8-203ENST00000524927 MRPS21P82921 87 aaKnown RBP7.5□□□□□ -1.21
NEDD8-203ENST00000524927 MALLQ13021 153 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 UBXN11Q5T124 520 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 TMEM200BQ69YZ2 307 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 SLC8B1Q6J4K2 584 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 CATIPQ7Z7H3 387 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 ZNF410Q86VK4 478 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 CCDC60Q8IWA6 550 aaPredicted RBP7.5□□□□□ -1.21
NEDD8-203ENST00000524927 CCDC33Q8N5R6 958 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 DCBLD1Q8N8Z6 715 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 HMGB4Q8WW32 186 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 RFFLQ8WZ73 363 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 EXTL1Q92935 676 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 KCNC2Q96PR1 638 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.5□□□□□ -1.21
NEDD8-203ENST00000524927 EBF3Q9H4W6 596 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 L2HGDHQ9H9P8 463 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 CYP4F11Q9HBI6 524 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 THSD1Q9NS62 852 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.5□□□□□ -1.212e-6■■■■■ 42.9
NEDD8-203ENST00000524927 CEP72Q9P209 647 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 CLCA2Q9UQC9 943 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 AKAP9Q99996 3911 aa7.5□□□□□ -1.21
NEDD8-203ENST00000524927 PCSK5Q92824 1860 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 RP1L1Q8IWN7 2480 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-203ENST00000524927 DDAH2O95865 285 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 GSPT1P15170 499 aaKnown RBP7.49□□□□□ -1.21
NEDD8-203ENST00000524927 U2AF2P26368 475 aaKnown RBP eCLIP7.49□□□□□ -1.21
NEDD8-203ENST00000524927 ASIC1P78348 528 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 BNC1Q01954 994 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 ROR1Q01973 937 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 GRIK3Q13003 919 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 ILKQ13418 452 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 HLTFQ14527 1009 aaKnown RBP eCLIP7.49□□□□□ -1.21
NEDD8-203ENST00000524927 MAN2A1Q16706 1144 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 NAIF1Q69YI7 327 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-203ENST00000524927 SLC34A3Q8N130 599 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 GLB1L3Q8NCI6 653 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-203ENST00000524927 FNIP1Q8TF40 1166 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 NRG4Q8WWG1 115 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 DNASE2BQ8WZ79 361 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 ARHGAP45Q92619 1136 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 CUL5Q93034 780 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 MIB2Q96AX9 1013 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 WDR92Q96MX6 357 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 PWWP2AQ96N64 755 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 MMS19Q96T76 1030 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 POLR3CQ9BUI4 534 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-203ENST00000524927 MAFFQ9ULX9 164 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 NUP210Q8TEM1 1887 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-203ENST00000524927 KNL1Q8NG31 2342 aa7.49□□□□□ -1.21
NEDD8-203ENST00000524927 TDRD15B5MCY1 1934 aaKnown RBP7.48□□□□□ -1.21
NEDD8-203ENST00000524927 A0A087WZ62 844 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 A0A0A6YYK5 440 aaPredicted RBP7.48□□□□□ -1.21
NEDD8-203ENST00000524927 IGHV1OR15-9A0A0B4J2B8 117 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 K7EQS6 105 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 TRIM13O60858 407 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 ZNF217O75362 1048 aa7.48□□□□□ -1.21
NEDD8-203ENST00000524927 FAM155BO75949 473 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms