RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	CHST13	Q8NET6	341 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	PBXIP1	Q96AQ6	731 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	DUS3L	Q96G46	650 aa	Known RBP	10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	VPS39	Q96JC1	886 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	NFKBIZ	Q9BYH8	718 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	DNAI2	Q9GZS0	605 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	UNC93B1	Q9H1C4	597 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	TRPV6	Q9H1D0	765 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	CAAP1	Q9H8G2	361 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	SEPT10	Q9P0V9	454 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	PTBP2	Q9UKA9	531 aa	Known RBP	10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	COPG1	Q9Y678	874 aa	Known RBP	10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	ERI2	A8K979	691 aa	Known RBP	10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141		C9IYK1	514 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	STX16-NPEPL1	H3BU86	382 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	XPO1	O14980	1071 aa	Known RBP	10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	CBFA2T3	O75081	653 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	CYP2C9	P11712	490 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	CD1E	P15812	388 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	TCN1	P20061	433 aa	Predicted RBP	10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	SLC7A1	P30825	629 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	ACADVL	P49748	655 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	ATXN3	P54252	364 aa	Predicted RBP	10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	PSME3	P61289	254 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	DLG2	Q15700	870 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	KIZ	Q2M2Z5	673 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	KCTD21	Q4G0X4	260 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	RWDD4	Q6NW29	188 aa	Known RBP	10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	MAMDC4	Q6UXC1	1216 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	GPR141	Q7Z602	305 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	ZNF567	Q8N184	647 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	CCDC185	Q8N715	623 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	CCNY	Q8ND76	341 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	HSPBAP1	Q96EW2	488 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	UHRF1	Q96T88	793 aa	Predicted RBP	10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	CAB39L	Q9H9S4	337 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	MYOZ2	Q9NPC6	264 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	OLAH	Q9NV23	265 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	ZDHHC2	Q9UIJ5	367 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	AFG3L2	Q9Y4W6	797 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	NR2E3	Q9Y5X4	410 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141		A0A087WXM4	84 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	ZCWPW2	A0A1B0GU75	182 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	HEATR9	A2RTY3	570 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	ZBTB42	B2RXF5	422 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	TK2	O00142	265 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	STAMBP	O95630	424 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	AP2A1	O95782	977 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	COL6A2	P12110	1019 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	NAGLU	P54802	743 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	PPIL2	Q13356	520 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	TMEM198	Q66K66	360 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	KCNMB4	Q86W47	210 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	DNAAF3	Q8N9W5	541 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	TNIP2	Q8NFZ5	429 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	OR52K1	Q8NGK4	314 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	STYX	Q8WUJ0	223 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	WRNIP1	Q96S55	665 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	AGAP2	Q99490	1192 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	GPR22	Q99680	433 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	NPAS2	Q99743	824 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	B3GNT5	Q9BYG0	378 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	PICK1	Q9NRD5	415 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	FAM49B	Q9NUQ9	324 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	SNX13	Q9Y5W8	968 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	C19orf81	C9J6K1	198 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	PHKA2	P46019	1235 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	CD97	P48960	835 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	ATXN1	P54253	815 aa	Known RBP	10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	HMGCS2	P54868	508 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	FAM187B	Q17R55	369 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141		Q6ZNX1	250 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	PLPPR4	Q7Z2D5	763 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	PID1	Q7Z2X4	250 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	ACOT1	Q86TX2	421 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	ADAM32	Q8TC27	787 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	LRTOMT	Q8WZ04	291 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	VPS50	Q96JG6	964 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	MAEL	Q96JY0	434 aa	Known RBP	10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	SCYL1	Q96KG9	808 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	RANBP9	Q96S59	729 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	SPAG4	Q9NPE6	437 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	DPP3	Q9NY33	737 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	HOXC10	Q9NYD6	342 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	KLHL8	Q9P2G9	620 aa	Predicted RBP	10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	SLC39A10	Q9ULF5	831 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	MFHAS1	Q9Y4C4	1052 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	PCDHGA7	Q9Y5G6	932 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	SNX9	Q9Y5X1	595 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	CIT	O14578	2027 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141		A0A1B0GTW7	788 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	TCRBV3S1	A0A5B6	114 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	TTK	P33981	857 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	CSRP3	P50461	194 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	NDST2	P52849	883 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	SLC12A1	Q13621	1099 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	ZBED5	Q49AG3	693 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	GLRA4	Q5JXX5	417 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	HERC6	Q8IVU3	1022 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms