RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	ADGRF5	Q8IZF2	1346 aa		5.13	□□□□□ -1.59
SREK1-213	ENST00000523655	USP47	Q96K76	1375 aa		5.13	□□□□□ -1.59
SREK1-213	ENST00000523655	CCDC7	Q96M83	1385 aa		5.13	□□□□□ -1.59
SREK1-213	ENST00000523655	YTHDC2	Q9H6S0	1430 aa	Known RBP	5.13	□□□□□ -1.59
SREK1-213	ENST00000523655	UNC80	Q8N2C7	3258 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	WNK3	Q9BYP7	1800 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	KIF13B	Q9NQT8	1826 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	PI4KAP2	A4QPH2	592 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	DOK2	O60496	412 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	USP1	O94782	785 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	TJP3	O95049	919 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	CNP	P09543	421 aa	Known RBP	5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	MYCL	P12524	364 aa	Predicted RBP	5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	PECAM1	P16284	738 aa	Predicted RBP	5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	WNT3	P56703	355 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	NSUN2	Q08J23	767 aa	Known RBP eCLIP	5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	ERV3-1	Q14264	604 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	DAZAP2	Q15038	168 aa	Predicted RBP	5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	NPY5R	Q15761	445 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	PKN2	Q16513	984 aa	Known RBP	5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	ATPAF1	Q5TC12	328 aa	Predicted RBP	5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	CST9	Q5W186	159 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	HAUS3	Q68CZ6	603 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	PLAG1	Q6DJT9	500 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	MRNIP	Q6NTE8	343 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	MIS18BP1	Q6P0N0	1132 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	ENOSF1	Q7L5Y1	443 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	GALNT16	Q8N428	558 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	DENND1A	Q8TEH3	1009 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	TRAPPC9	Q96Q05	1148 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	MMS19	Q96T76	1030 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	AP1M1	Q9BXS5	423 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	PRSS22	Q9GZN4	317 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	XPNPEP3	Q9NQH7	507 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	SH3GLB2	Q9NR46	395 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	PLSCR4	Q9NRQ2	329 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	ELOVL5	Q9NYP7	299 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	DKK4	Q9UBT3	224 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	ARHGAP26	Q9UNA1	814 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	NUP155	O75694	1391 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	MKI67	P46013	3256 aa	Known RBP	5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	USP54	Q70EL1	1684 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	QRICH2	Q9H0J4	1663 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	VCAN	P13611	3396 aa		5.12	□□□□□ -1.59
SREK1-213	ENST00000523655	BRCA1	P38398	1863 aa	Known RBP	5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	LOC102723971	A0A1B0GUV8	181 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.11	□□□□□ -1.59
SREK1-213	ENST00000523655		H7C4K7	107 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	RAB27B	O00194	218 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	CES2	O00748	559 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	CCP110	O43303	1012 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	DNPH1	O43598	174 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	AHCYL1	O43865	530 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	MOSPD3	O75425	235 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	HNRNPA1	P09651	372 aa	Known RBP eCLIP	5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	CYP2C9	P11712	490 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	RXRA	P19793	462 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	MST1	P26927	711 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	CPT1A	P50416	773 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	BCAT1	P54687	386 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	ALDH18A1	P54886	795 aa	Known RBP	5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	TMF1	P82094	1093 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	ARHGEF7	Q14155	803 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	TST	Q16762	297 aa	Known RBP	5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	TBC1D25	Q3MII6	688 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	FAXC	Q5TGI0	409 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	NFRKB	Q6P4R8	1299 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	CCDC129	Q6ZRS4	1044 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	BCDIN3D	Q7Z5W3	292 aa	Known RBP	5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	TMEM57	Q8N5G2	664 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	CSGALNACT1	Q8TDX6	532 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	TIGD1	Q96MW7	591 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	FCRL4	Q96PJ5	515 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	SNX18	Q96RF0	628 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	EFHD1	Q9BUP0	239 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	VPS16	Q9H269	839 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	GHITM	Q9H3K2	345 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	ZBTB26	Q9HCK0	441 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	G6PC2	Q9NQR9	355 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	TBX20	Q9UMR3	447 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	DAPP1	Q9UN19	280 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	ANKRD36B	Q8N2N9	1353 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	LY75	O60449	1722 aa		5.11	□□□□□ -1.59
SREK1-213	ENST00000523655	SYNDIG1L	A6NDD5	238 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	OR2W5	A6NFC9	320 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	POC1B-GALNT4	F8VUJ3	575 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	ADAM10	O14672	748 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	SRGAP2	O75044	1071 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	ABCC6	O95255	1503 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	NSD2	O96028	1365 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	IGKV2-30	P06310	120 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	ANXA6	P08133	673 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	ALOX12	P18054	663 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	CHM	P24386	653 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	SLC5A2	P31639	672 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	ATIC	P31939	592 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	EPHX2	P34913	555 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	STAT1	P42224	750 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	POLD2	P49005	469 aa		5.1	□□□□□ -1.59
SREK1-213	ENST00000523655	ZBED6	P86452	979 aa		5.1	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms