RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 UNCXA6NJT0 531 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 PIGNO95427 931 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 ADH1AP07327 375 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 CALB2P22676 271 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 GLUD2P49448 558 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 NAB1Q13506 487 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 TAPT1Q6NXT6 567 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 OTOP3Q7RTS5 596 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 CMC1Q7Z7K0 106 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 SCAMP5Q8TAC9 235 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 RSPH1Q8WYR4 309 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 MOXD2PA6NHM9 499 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 BTN3A1O00481 513 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 SNX3O60493 162 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 CXCL14O95715 111 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 TKTP29401 623 aaKnown RBP13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 PURAQ00577 322 aaKnown RBP13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 CCDC15Q0P6D6 951 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 RCN1Q15293 331 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 FUT11Q495W5 492 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 TEX44Q53QW1 395 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 B3GALT6Q96L58 329 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 ACOX2Q99424 681 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 GLOD4Q9HC38 313 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 BPIFA1Q9NP55 256 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 SPASTQ9UBP0 616 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 FBXO5Q9UKT4 447 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 ACTL7BQ9Y614 415 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 MYH10P35580 1976 aa13.27□□□□□ -0.29
PCDHGB1-201ENST00000523390 SLCO1B7G3V0H7 640 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 KATNA1O75449 491 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 ITGA2BP08514 1039 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 EDNRBP24530 442 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 IL1R2P27930 398 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 DCAF12L1Q5VU92 463 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 RASAL3Q86YV0 1011 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 SLC22A9Q8IVM8 553 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 LMO3Q8TAP4 145 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 ZDHHC6Q9H6R6 413 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 COG4Q9H9E3 785 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 CATSPERZQ9NTU4 200 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 SPG21Q9NZD8 308 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 MRPS23Q9Y3D9 190 aaKnown RBP13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 NR2E3Q9Y5X4 410 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 STRCP1A6NGW2 1772 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 SEC24DO94855 1032 aaPredicted RBP13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 PCDH8O95206 1070 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 SERPINA4P29622 427 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 IFNA8P32881 189 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 AIF1P55008 147 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 LRRC74AQ0VAA2 488 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 BST1Q10588 318 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 NR6A1Q15406 480 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 CYTH1Q15438 398 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 SPDYE7PQ495Y7 208 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 LDLRAD1Q5T700 205 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 RFWD3Q6PCD5 774 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 C16orf70Q9BSU1 422 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 CCDC90BQ9GZT6 254 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 RCOR3Q9P2K3 495 aaPredicted RBP13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 THEGQ9P2T0 379 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 TAGLN3Q9UI15 199 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 COL2A1P02458 1487 aaPredicted RBP13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 NR5A2O00482 541 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 CCNT2O60583 730 aaKnown RBP13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 RNASEH1O60930 286 aaKnown RBP13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 CCDC166P0CW27 439 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 CCND3P30281 292 aaPredicted RBP13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 PPM1AP35813 382 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 NRLP54845 237 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 GDF10P55107 478 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 MAP3K10Q02779 954 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 GALNT3Q14435 633 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 POM121L1PQ3SYA9 428 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 ANKS6Q68DC2 871 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 ECHDC2Q86YB7 292 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 LRRC49Q8IUZ0 686 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 MAB21L3Q8N8X9 362 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 OXNAD1Q96HP4 312 aaPredicted RBP13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 MLPHQ9BV36 600 aaPredicted RBP13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 THUMPD3Q9BV44 507 aaKnown RBP13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 SDCBP2Q9H190 292 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 OSGEPL1Q9H4B0 414 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 ALG9Q9H6U8 611 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 MID1IP1Q9NPA3 183 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 STYXL1Q9Y6J8 313 aa13.26□□□□□ -0.29
PCDHGB1-201ENST00000523390 UBDO15205 165 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 CYLC2Q14093 348 aaPredicted RBP13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 CRYMQ14894 314 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 FNBP1LQ5T0N5 605 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 C11orf96Q7Z7L8 435 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 C12orf50Q8NA57 414 aaPredicted RBP13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 OR6K2Q8NGY2 324 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 BTN2A3PQ96KV6 586 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 C17orf80Q9BSJ5 609 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 YY1AP1Q9H869 796 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 WARS2Q9UGM6 360 aaKnown RBP13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 DCXO43602 365 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 SYPL2Q5VXT5 272 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 PRSS55Q6UWB4 352 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms