RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 LRRC4Q9HBW1 653 aa6.17□□□□□ -1.42
SPIDR-216ENST00000521918 UBE2TQ9NPD8 197 aaPredicted RBP6.17□□□□□ -1.42
SPIDR-216ENST00000521918 OLA1Q9NTK5 396 aaKnown RBP6.17□□□□□ -1.42
SPIDR-216ENST00000521918 SUSD2Q9UGT4 822 aa6.17□□□□□ -1.42
SPIDR-216ENST00000521918 RASAL2Q9UJF2 1139 aa6.17□□□□□ -1.42
SPIDR-216ENST00000521918 STOML2Q9UJZ1 356 aa6.17□□□□□ -1.42
SPIDR-216ENST00000521918 FBXO10Q9UK96 956 aa6.17□□□□□ -1.42
SPIDR-216ENST00000521918 AGO1Q9UL18 857 aaKnown RBP6.17□□□□□ -1.42
SPIDR-216ENST00000521918 SMG5Q9UPR3 1016 aaKnown RBP6.17□□□□□ -1.42
SPIDR-216ENST00000521918 SH3BP1Q9Y3L3 701 aa6.17□□□□□ -1.42
SPIDR-216ENST00000521918 NFE2L3Q9Y4A8 694 aa6.17□□□□□ -1.42
SPIDR-216ENST00000521918 ZNF451Q9Y4E5 1061 aa6.17□□□□□ -1.42
SPIDR-216ENST00000521918 SDK1Q7Z5N4 2213 aa6.17□□□□□ -1.42
SPIDR-216ENST00000521918 CCDC163A0A0D9SF12 145 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.16□□□□□ -1.42
SPIDR-216ENST00000521918 B2RBV5 119 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 PAPSS1O43252 624 aaPredicted RBP6.16□□□□□ -1.42
SPIDR-216ENST00000521918 MSI1O43347 362 aaKnown RBP6.16□□□□□ -1.42
SPIDR-216ENST00000521918 SIGLEC6O43699 453 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 STK10O94804 968 aaKnown RBP6.16□□□□□ -1.42
SPIDR-216ENST00000521918 FBXO21O94952 628 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 LETM1O95202 739 aaPredicted RBP6.16□□□□□ -1.42
SPIDR-216ENST00000521918 LATS1O95835 1130 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 MBD3O95983 291 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 IGLV3-25P01717 112 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 LTFP02788 710 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 CISD3P0C7P0 127 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 PNMA6AP0CW24 399 aaPredicted RBP6.16□□□□□ -1.42
SPIDR-216ENST00000521918 KRT5P13647 590 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 LCP1P13796 627 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 TYRP14679 529 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 ZNF18P17022 549 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 CD247P20963 164 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 TGM1P22735 817 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 EEF1GP26641 437 aaKnown RBP6.16□□□□□ -1.42
SPIDR-216ENST00000521918 CORO1AP31146 461 aaKnown RBP6.16□□□□□ -1.42
SPIDR-216ENST00000521918 GRIA2P42262 883 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 FNTBP49356 437 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 MFAP3P55082 362 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 GP2P55259 537 aaKnown RBP6.16□□□□□ -1.42
SPIDR-216ENST00000521918 COG7P83436 770 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 GOLGA8FQ08AF8 430 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 GOLGA8DPQ0D2H9 430 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 SRSF5Q13243 272 aaKnown RBP6.16□□□□□ -1.42
SPIDR-216ENST00000521918 PDCLQ13371 301 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 EIF4EBP2Q13542 120 aaPredicted RBP6.16□□□□□ -1.42
SPIDR-216ENST00000521918 DMC1Q14565 340 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 PPP2R5DQ14738 602 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 NCAPHQ15003 741 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 KRT31Q15323 416 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 STX1AQ16623 288 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 CCDC183Q5T5S1 534 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 KLHDC7AQ5VTJ3 777 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 BSPRYQ5W0U4 402 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 BTBD8Q5XKL5 378 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 C6orf15Q6UXA7 325 aaPredicted RBP6.16□□□□□ -1.42
SPIDR-216ENST00000521918 BEND5Q7L4P6 421 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 APTXQ7Z2E3 356 aaKnown RBP6.16□□□□□ -1.42
SPIDR-216ENST00000521918 TMEM110Q86TL2 294 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 LONP2Q86WA8 852 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 RASSF3Q86WH2 238 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 FMNL3Q8IVF7 1028 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 FAM71AQ8IYT1 594 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 SIX6OS1Q8N1H7 587 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 WDTC1Q8N5D0 677 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 CAMKK1Q8N5S9 505 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 TERB1Q8NA31 727 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 IL17RCQ8NAC3 791 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 ZNF606Q8WXB4 792 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 ATRIPQ8WXE1 791 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 EXOC4Q96A65 974 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 CPXM1Q96SM3 734 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 PNKPQ96T60 521 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 NACA2Q9H009 215 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 ABCC13Q9NSE7 274 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 GPATCH2Q9NW75 528 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 PRR13Q9NZ81 148 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 MARCH2Q9P0N8 246 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 EBF1Q9UH73 591 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 LSM7Q9UK45 103 aaKnown RBP6.16□□□□□ -1.42
SPIDR-216ENST00000521918 MMP17Q9ULZ9 603 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 ZNF510Q9Y2H8 683 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 HBS1LQ9Y450 684 aaKnown RBP6.16□□□□□ -1.42
SPIDR-216ENST00000521918 FHOD1Q9Y613 1164 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 PLXND1Q9Y4D7 1925 aa6.16□□□□□ -1.42
SPIDR-216ENST00000521918 CNOT1A5YKK6 2376 aaKnown RBP6.15□□□□□ -1.42
SPIDR-216ENST00000521918 SLC12A8A0AV02 714 aa6.15□□□□□ -1.42
SPIDR-216ENST00000521918 PRRT4C9JH25 899 aa6.15□□□□□ -1.42
SPIDR-216ENST00000521918 E5RJQ4 531 aa6.15□□□□□ -1.42
SPIDR-216ENST00000521918 NEDD8-MDP1E9PL57 170 aa6.15□□□□□ -1.42
SPIDR-216ENST00000521918 F8VZ95 297 aa6.15□□□□□ -1.42
SPIDR-216ENST00000521918 GOLGA6L22H0YM25 854 aa6.15□□□□□ -1.42
SPIDR-216ENST00000521918 SGK1O00141 431 aa6.15□□□□□ -1.42
SPIDR-216ENST00000521918 FOXN3O00409 490 aaPredicted RBP6.15□□□□□ -1.42
SPIDR-216ENST00000521918 EPHB6O15197 1021 aa6.15□□□□□ -1.42
SPIDR-216ENST00000521918 THAP12O43422 761 aa6.15□□□□□ -1.42
SPIDR-216ENST00000521918 ATG13O75143 517 aa6.15□□□□□ -1.42
SPIDR-216ENST00000521918 PRAMEF1O95521 474 aa6.15□□□□□ -1.42
SPIDR-216ENST00000521918 HMBSP08397 361 aa6.15□□□□□ -1.42
SPIDR-216ENST00000521918 UCHL3P15374 230 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms