RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CNTN1Q12860 1018 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 ZNF398Q8TD17 642 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 ZNF670Q9BS34 389 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 SNRNP25Q9BV90 132 aaKnown RBP16.43■□□□□ 0.22
USP42-207ENST00000521713 ELOVL6Q9H5J4 265 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 A0A0A0MRY4 1105 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 WFS1O76024 890 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 MGAT1P26572 445 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 CLK2P49760 499 aaKnown RBP16.43■□□□□ 0.22
USP42-207ENST00000521713 SERPINH1P50454 418 aaKnown RBP16.43■□□□□ 0.22
USP42-207ENST00000521713 CCDC81Q6ZN84 652 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 SPATA13Q96N96 652 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 C17orf80Q9BSJ5 609 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 HMG20AQ9NP66 347 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 TMEM161AQ9NX61 479 aa16.43■□□□□ 0.22
USP42-207ENST00000521713 DYTNA2CJ06 578 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 NT5C1B-RDH14C9J2C7 533 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 H3BMM5 538 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 PSMG1O95456 288 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 HALP42357 657 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 PRKAA2P54646 552 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 MCOLN3Q8TDD5 553 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 TSEN34Q9BSV6 310 aaKnown RBP16.42■□□□□ 0.22
USP42-207ENST00000521713 RGS18Q9NS28 235 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 VPS51Q9UID3 782 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 RAD51BO15315 384 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 VAPBO95292 243 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 KRT6AP02538 564 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 KRT6BP04259 564 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 ERVK-10P10266 1014 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 BMP6P22004 513 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 KRT6CP48668 564 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 SETMARQ53H47 684 aaPredicted RBP16.42■□□□□ 0.22
USP42-207ENST00000521713 RNF43Q68DV7 783 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 PRMT9Q6P2P2 845 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 LRRN4CLQ8ND94 238 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 FAM136AQ96C01 138 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 ZFYVE19Q96K21 471 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 ECSITQ9BQ95 431 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 LHX5Q9H2C1 402 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 NRDE2Q9H7Z3 1164 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 ACTL7BQ9Y614 415 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 RPTORQ8N122 1335 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 KLHL41O60662 606 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 SKIV2L2P42285 1042 aaKnown RBP16.42■□□□□ 0.22
USP42-207ENST00000521713 ZNF470Q6ECI4 717 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 ZNF438Q7Z4V0 828 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 DENND1CQ8IV53 801 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 AGAP11Q8TF27 550 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 RMND5AQ9H871 391 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 NMRAL1Q9HBL8 299 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 AHSPQ9NZD4 102 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 FBXO10Q9UK96 956 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 DNAJC16Q9Y2G8 782 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 STARD13Q9Y3M8 1113 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 FCHO1O14526 889 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 SPTLC1O15269 473 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 TSPAN1O60635 241 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 TTC27Q6P3X3 843 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 PSTKQ8IV42 348 aaKnown RBP16.42■□□□□ 0.22
USP42-207ENST00000521713 SVOPQ8N4V2 548 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 OXNAD1Q96HP4 312 aaPredicted RBP16.42■□□□□ 0.22
USP42-207ENST00000521713 CPNE1Q99829 537 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 C1orf50Q9BV19 199 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 TLE6Q9H808 572 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 NID2Q14112 1375 aa16.42■□□□□ 0.22
USP42-207ENST00000521713 WNT7AO00755 349 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 MED26O95402 600 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 ALADP13716 330 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 ATP6V1C1P21283 382 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 UBE3AQ05086 875 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 DPYSL3Q14195 570 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 DDR2Q16832 855 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 SPATA20Q8TB22 786 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 RNF157Q96PX1 679 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 CCDC3Q9BQI4 270 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 IL22Q9GZX6 179 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 PDZD7Q9H5P4 517 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 CYP4F12Q9HCS2 524 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 ACP6Q9NPH0 428 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 IMPAD1Q9NX62 359 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 SNTNA6NMZ2 147 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 BTNL10A8MVZ5 291 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 CBFA2T3O75081 653 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 UNC5CO95185 931 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 CYP1A1P04798 512 aaPredicted RBP16.41■□□□□ 0.22
USP42-207ENST00000521713 PRIM2P49643 509 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 ZNF662Q6ZS27 426 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 TADA1Q96BN2 335 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 OMDQ99983 421 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 SEMA4AQ9H3S1 761 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 AKAP12Q02952 1782 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 SNX3O60493 162 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 LGR5O75473 907 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 MTA2O94776 668 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 GPC1P35052 558 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 THOP1P52888 689 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 CCDC142Q17RM4 750 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 SERPINA13PQ6UXR4 307 aa16.41■□□□□ 0.22
USP42-207ENST00000521713 TRPC4APQ8TEL6 797 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms