RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 HPCAL4Q9UM19 191 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 NCKAP1Q9Y2A7 1128 aa9.67□□□□□ -0.86
CLK4-209ENST00000521621 CACNA1IQ9P0X4 2223 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 TSPAN11A1L157 253 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 METTL12A8MUP2 240 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 TTC34A8MYJ7 566 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 PRAMEF11O60813 436 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 DNTTP04053 509 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 PRNPP04156 253 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 RARAP10276 462 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 IL1R2P27930 398 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 EPHB2P29323 1055 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 HSPA9P38646 679 aaKnown RBP9.66□□□□□ -0.86
CLK4-209ENST00000521621 IL10RBQ08334 325 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 NSUN2Q08J23 767 aaKnown RBP eCLIP9.66□□□□□ -0.86
CLK4-209ENST00000521621 PAFAH1B3Q15102 231 aaKnown RBP9.66□□□□□ -0.86
CLK4-209ENST00000521621 SCYL2Q6P3W7 929 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 C22orf39Q6P5X5 142 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 TMEM139Q8IV31 216 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 SLC35G2Q8TBE7 412 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 FAM174AQ8TBP5 190 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 TRIM7Q9C029 511 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 ATP13A1Q9HD20 1204 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 CTTNBP2NLQ9P2B4 639 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 SUSD2Q9UGT4 822 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 A0A0D9SEW6 157 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 ARHGAP42A6NI28 874 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 UPK3BL1B0FP48 263 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 UPK3BL2E5RIL1 263 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 C1QTNF3-AMACRE9PGA6 284 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 AP1G1O43747 822 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 ACADMP11310 421 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 DLG2Q15700 870 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 WDR45BQ5MNZ6 344 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 SYT12Q8IV01 421 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 OR2A12Q8NGT7 310 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 VOPP1Q96AW1 172 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 TUBGCP5Q96RT8 1024 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 PCDH18Q9HCL0 1135 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 POLR3BQ9NW08 1133 aaPredicted RBP9.66□□□□□ -0.86
CLK4-209ENST00000521621 DDX56Q9NY93 547 aaKnown RBP9.66□□□□□ -0.86
CLK4-209ENST00000521621 CWC15Q9P013 229 aaKnown RBP9.66□□□□□ -0.86
CLK4-209ENST00000521621 DKK3Q9UBP4 350 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 SLCO3A1Q9UIG8 710 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 FARP1Q9Y4F1 1045 aaPredicted RBP9.66□□□□□ -0.86
CLK4-209ENST00000521621 EPN1Q9Y6I3 576 aaPredicted RBP9.66□□□□□ -0.86
CLK4-209ENST00000521621 ZDBF2Q9HCK1 2354 aa9.66□□□□□ -0.86
CLK4-209ENST00000521621 GOLGA6L6A8MZA4 724 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 RASA4BC9J798 803 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 RASA4O43374 803 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 NDUFA10O95299 355 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 BCKDHBP21953 392 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 IL4RP24394 825 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 SERPINB6P35237 376 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 ARL4AP40617 200 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 CA9Q16790 459 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 CARD16Q5EG05 197 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 HEATR6Q6AI08 1181 aaKnown RBP9.65□□□□□ -0.86
CLK4-209ENST00000521621 ALYREFQ86V81 257 aaKnown RBP9.65□□□□□ -0.86
CLK4-209ENST00000521621 TRIM69Q86WT6 500 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 MAP7D3Q8IWC1 876 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 ARHGAP12Q8IWW6 846 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 PYROXD2Q8N2H3 581 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 RAB7BQ96AH8 199 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 CSPG4P5Q96PW8 444 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 PACSIN1Q9BY11 444 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 ZDHHC5Q9C0B5 715 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 PREBQ9HCU5 417 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 NCDNQ9UBB6 729 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 PCDHA13Q9Y5I0 950 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 PSTPIP1O43586 416 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 PLRG1O43660 514 aaKnown RBP9.65□□□□□ -0.86
CLK4-209ENST00000521621 RNGTTO60942 597 aaKnown RBP9.65□□□□□ -0.86
CLK4-209ENST00000521621 ZNF189O75820 626 aaPredicted RBP9.65□□□□□ -0.86
CLK4-209ENST00000521621 WASP42768 502 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 MAPK8P45983 427 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 SYCP2LQ5T4T6 812 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 LYSMD4Q5XG99 296 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 RWDD4Q6NW29 188 aaKnown RBP9.65□□□□□ -0.86
CLK4-209ENST00000521621 OR7D4Q8NG98 312 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 C1orf216Q8TAB5 229 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 TSGA13Q96PP4 275 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 DHX35Q9H5Z1 703 aaKnown RBP9.65□□□□□ -0.86
CLK4-209ENST00000521621 NDFIP2Q9NV92 336 aa9.65□□□□□ -0.86
CLK4-209ENST00000521621 TRIOO75962 3097 aa9.65□□□□□ -0.87
CLK4-209ENST00000521621 A0A1W2PQ67 120 aa9.64□□□□□ -0.87
CLK4-209ENST00000521621 CFAP69A5D8W1 941 aa9.64□□□□□ -0.87
CLK4-209ENST00000521621 LATO43561 262 aa9.64□□□□□ -0.87
CLK4-209ENST00000521621 HLA-EP13747 358 aa9.64□□□□□ -0.87
CLK4-209ENST00000521621 ERCC2P18074 760 aa9.64□□□□□ -0.87
CLK4-209ENST00000521621 ITGB7P26010 798 aa9.64□□□□□ -0.87
CLK4-209ENST00000521621 PTPN7P35236 360 aa9.64□□□□□ -0.87
CLK4-209ENST00000521621 MAGEA1P43355 309 aa9.64□□□□□ -0.87
CLK4-209ENST00000521621 RENBPP51606 427 aa9.64□□□□□ -0.87
CLK4-209ENST00000521621 SPA17Q15506 151 aa9.64□□□□□ -0.87
CLK4-209ENST00000521621 ALG1LQ6GMV1 187 aa9.64□□□□□ -0.87
CLK4-209ENST00000521621 TFAP2DQ7Z6R9 452 aa9.64□□□□□ -0.87
CLK4-209ENST00000521621 CCDC112Q8NEF3 446 aa9.64□□□□□ -0.87
CLK4-209ENST00000521621 OR2T34Q8NGX1 318 aa9.64□□□□□ -0.87
CLK4-209ENST00000521621 PPP1R16AQ96I34 528 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms