RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 OR2T3Q8NH03 318 aa12.77□□□□□ -0.37
HDAC2-211ENST00000521233 EXD1Q8NHP7 514 aa12.77□□□□□ -0.37
HDAC2-211ENST00000521233 HMGB4Q8WW32 186 aa12.77□□□□□ -0.37
HDAC2-211ENST00000521233 RAPGEF5Q92565 580 aa12.77□□□□□ -0.37
HDAC2-211ENST00000521233 NELL1Q92832 810 aa12.77□□□□□ -0.37
HDAC2-211ENST00000521233 HMCESQ96FZ2 354 aa12.77□□□□□ -0.37
HDAC2-211ENST00000521233 RPL10LQ96L21 214 aaKnown RBP12.77□□□□□ -0.37
HDAC2-211ENST00000521233 RRAGDQ9NQL2 400 aaPredicted RBP12.77□□□□□ -0.37
HDAC2-211ENST00000521233 C2orf42Q9NWW7 574 aa12.77□□□□□ -0.37
HDAC2-211ENST00000521233 TRIM10Q9UDY6 481 aa12.77□□□□□ -0.37
HDAC2-211ENST00000521233 AMFRQ9UKV5 643 aa12.77□□□□□ -0.37
HDAC2-211ENST00000521233 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
HDAC2-211ENST00000521233 ARIH1Q9Y4X5 557 aaPredicted RBP12.77□□□□□ -0.37
HDAC2-211ENST00000521233 RAD54BQ9Y620 910 aa12.77□□□□□ -0.37
HDAC2-211ENST00000521233 TTC34A8MYJ7 566 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 WASH3PC4AMC7 463 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 DFFAO00273 331 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 ALOX15BO15296 676 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 ZRANB2O95218 330 aaKnown RBP eCLIP12.76□□□□□ -0.37
HDAC2-211ENST00000521233 SRCP12931 536 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 MX2P20592 715 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 COL9A1P20849 921 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 IL4RP24394 825 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 CNR2P34972 360 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 RECQLP46063 649 aaPredicted RBP12.76□□□□□ -0.37
HDAC2-211ENST00000521233 RWDD2BP57060 319 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 COPS2P61201 443 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 ARF5P84085 180 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 ZBTB16Q05516 673 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 SFSWAPQ12872 951 aaKnown RBP12.76□□□□□ -0.37
HDAC2-211ENST00000521233 MMRN1Q13201 1228 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 PAFAH1B3Q15102 231 aaKnown RBP12.76□□□□□ -0.37
HDAC2-211ENST00000521233 DLG2Q15700 870 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 PPP2R5EQ16537 467 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 TTC31Q49AM3 519 aaPredicted RBP12.76□□□□□ -0.37
HDAC2-211ENST00000521233 ACCSLQ4AC99 568 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 TMCO4Q5TGY1 634 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 ZNF776Q68DI1 518 aaPredicted RBP12.76□□□□□ -0.37
HDAC2-211ENST00000521233 TSSK4Q6SA08 328 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 NT5DC3Q86UY8 548 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 C11orf74Q86VG3 221 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 CCDC50Q8IVM0 306 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 ARHGAP12Q8IWW6 846 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 RCOR2Q8IZ40 523 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 PGBD3Q8N328 593 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 NPWQ8N729 165 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 MDGA1Q8NFP4 955 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 TRIM58Q8NG06 486 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 PCDH19Q8TAB3 1148 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 ATRIPQ8WXE1 791 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 ISG20Q96AZ6 181 aaKnown RBP12.76□□□□□ -0.37
HDAC2-211ENST00000521233 CELF6Q96J87 481 aaKnown RBP12.76□□□□□ -0.37
HDAC2-211ENST00000521233 SPACA7Q96KW9 195 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 RNF157Q96PX1 679 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 MAK16Q9BXY0 300 aaKnown RBP12.76□□□□□ -0.37
HDAC2-211ENST00000521233 KLC2Q9H0B6 622 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 KCNF1Q9H3M0 494 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 SP110Q9HB58 689 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 CD248Q9HCU0 757 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 LZTFL1Q9NQ48 299 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 PRSS16Q9NQE7 514 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 SLCO3A1Q9UIG8 710 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 PCDHA3Q9Y5H8 950 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 CAPN6Q9Y6Q1 641 aa12.76□□□□□ -0.37
HDAC2-211ENST00000521233 NYNRINQ9P2P1 1898 aaKnown RBP12.76□□□□□ -0.37
HDAC2-211ENST00000521233 A0A0U1RQJ8 604 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 C3orf70A6NLC5 250 aaPredicted RBP12.75□□□□□ -0.37
HDAC2-211ENST00000521233 APOL1O14791 398 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 MFSD11O43934 449 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 PRAMEF11O60813 436 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 SIN3BO75182 1162 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 ZNF217O75362 1048 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 GABRG2P18507 467 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 NDUFV2P19404 249 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 GLDCP23378 1020 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 NUMBP49757 651 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 PAPOLAP51003 745 aaKnown RBP12.75□□□□□ -0.37
HDAC2-211ENST00000521233 IL10RBQ08334 325 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 TCF15Q12870 199 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 RFTN1Q14699 578 aaPredicted RBP12.75□□□□□ -0.37
HDAC2-211ENST00000521233 USP39Q53GS9 565 aaKnown RBP12.75□□□□□ -0.37
HDAC2-211ENST00000521233 INO80DQ53TQ3 878 aaPredicted RBP12.75□□□□□ -0.37
HDAC2-211ENST00000521233 TFDP3Q5H9I0 405 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 NCBP2-AS2Q69YL0 99 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 HEATR6Q6AI08 1181 aaKnown RBP12.75□□□□□ -0.37
HDAC2-211ENST00000521233 KIAA1211LQ6NV74 962 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 KIAA1324Q6UXG2 1013 aaKnown RBP12.75□□□□□ -0.37
HDAC2-211ENST00000521233 LINGO4Q6UY18 593 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 SPOCD1Q6ZMY3 1216 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 Q6ZVU0 165 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 RFX6Q8HWS3 928 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 ZNF366Q8N895 744 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 ZBTB44Q8NCP5 570 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 FRS2Q8WU20 508 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 NSMCE1Q8WV22 266 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 OR8D1Q8WZ84 308 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 PRCCQ92733 491 aaPredicted RBP12.75□□□□□ -0.37
HDAC2-211ENST00000521233 RNF25Q96BH1 459 aaPredicted RBP12.75□□□□□ -0.37
HDAC2-211ENST00000521233 MRGPRX1Q96LB2 322 aa12.75□□□□□ -0.37
HDAC2-211ENST00000521233 ZNF599Q96NL3 588 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms