RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 NLRP14Q86W24 1093 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 FAM72BQ86X60 149 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 CCDC185Q8N715 623 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 OR2A12Q8NGT7 310 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 PIP4K2CQ8TBX8 421 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 SPON2Q9BUD6 331 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 MAGEB5Q9BZ81 275 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 EDEM3Q9BZQ6 932 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 IL21RQ9HBE5 538 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 AIPL1Q9NZN9 384 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 WASF3Q9UPY6 502 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 ANKRD6Q9Y2G4 727 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 FARP1Q9Y4F1 1045 aaPredicted RBP17.45■□□□□ 0.38
SQLE-205ENST00000521232 SPEGQ15772 3267 aa17.45■□□□□ 0.38
SQLE-205ENST00000521232 PLXNA2O75051 1894 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 CXorf51AA0A1B0GTR3 108 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 LRRC53A6NM62 1247 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 C1QTNF3-AMACRE9PGA6 284 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 SH3BP5O60239 455 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 LRIG2O94898 1065 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 PLEKP08567 350 aaPredicted RBP17.44■□□□□ 0.38
SQLE-205ENST00000521232 RHOQP17081 205 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 GLDCP23378 1020 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 RRM1P23921 792 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 RPL7AP62424 266 aaKnown RBP17.44■□□□□ 0.38
SQLE-205ENST00000521232 SCAPQ12770 1279 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 RETSATQ6NUM9 610 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 LINGO4Q6UY18 593 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 SLFN11Q7Z7L1 901 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 TMIEQ8NEW7 156 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 CCDC114Q96M63 670 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 ACE2Q9BYF1 805 aaPredicted RBP17.44■□□□□ 0.38
SQLE-205ENST00000521232 TTYH3Q9C0H2 523 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 ATP13A1Q9HD20 1204 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 NDFIP2Q9NV92 336 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 TMEM248Q9NWD8 314 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 TAS2R14Q9NYV8 317 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 NEU3Q9UQ49 428 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 SNX11Q9Y5W9 270 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 DOCK9Q9BZ29 2069 aa17.44■□□□□ 0.38
SQLE-205ENST00000521232 TBC1D3DA0A087WVF3 549 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 TBC1D3IA0A087WXS9 549 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 TBC1D3EA0A087X179 549 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 TBC1D3KA0A087X1G2 549 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 SYCE3A1L190 88 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 ANKRD62A6NC57 917 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 TBC1D3FA6NER0 549 aaPredicted RBP17.43■□□□□ 0.38
SQLE-205ENST00000521232 TBC1D3LB9A6J9 549 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 CBX4O00257 560 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 PLK4O00444 970 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 VILLO15195 856 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 CCP110O43303 1012 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 LATO43561 262 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 PLRG1O43660 514 aaKnown RBP17.43■□□□□ 0.38
SQLE-205ENST00000521232 BNIP3LO60238 219 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 ZNF821O75541 412 aaPredicted RBP17.43■□□□□ 0.38
SQLE-205ENST00000521232 CTSLP07711 333 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 TBC1D3HP0C7X1 549 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 CHRNA3P32297 505 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 PRKCIP41743 596 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 MAPKAPK2P49137 400 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 FAM193AP78312 1265 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 ARF5P84085 180 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 CNTN1Q12860 1018 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 AGBL4Q5VU57 503 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 TBC1D3GQ6DHY5 549 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 TBC1D3CQ6IPX1 549 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 RWDD4Q6NW29 188 aaKnown RBP17.43■□□□□ 0.38
SQLE-205ENST00000521232 DRC7Q8IY82 874 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 TBC1D3Q8IZP1 549 aaPredicted RBP17.43■□□□□ 0.38
SQLE-205ENST00000521232 CAMK1GQ96NX5 476 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 MCEEQ96PE7 176 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 CNPY3Q9BT09 278 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 CEP44Q9C0F1 390 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 HAUS4Q9H6D7 363 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 CBX8Q9HC52 389 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 TM7SF3Q9NS93 570 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 FNDC3AQ9Y2H6 1198 aaKnown RBP17.43■□□□□ 0.38
SQLE-205ENST00000521232 PCDHGB2Q9Y5G2 931 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 FRYQ5TBA9 3013 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 TMEM131Q92545 1883 aa17.43■□□□□ 0.38
SQLE-205ENST00000521232 MAP1BP46821 2468 aaKnown RBP17.43■□□□□ 0.38
SQLE-205ENST00000521232 SPAARA0A1B0GVQ0 90 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 RTN2O75298 545 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 CD160O95971 181 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 SERPINC1P01008 464 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 GZMAP12544 262 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 L1CAMP32004 1257 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 ETFBP38117 255 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 CTSKP43235 329 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 SERPINH1P50454 418 aaKnown RBP17.42■□□□□ 0.38
SQLE-205ENST00000521232 SIM1P81133 766 aaPredicted RBP17.42■□□□□ 0.38
SQLE-205ENST00000521232 ASIC2Q16515 512 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 FIGNQ5HY92 759 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 KCNT1Q5JUK3 1230 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 SFMBT2Q5VUG0 894 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 C22orf39Q6P5X5 142 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 DCUN1D2Q6PH85 259 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 ZNF571Q7Z3V5 609 aaPredicted RBP17.42■□□□□ 0.38
SQLE-205ENST00000521232 NAXDQ8IW45 347 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms