RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 PABPC3Q9H361 631 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-221ENST00000520339 THAP9Q9H5L6 903 aa9.58□□□□□ -0.88
CTNNA1-221ENST00000520339 GAREM1Q9H706 876 aa9.58□□□□□ -0.88
CTNNA1-221ENST00000520339 POPDC2Q9HBU9 364 aa9.58□□□□□ -0.88
CTNNA1-221ENST00000520339 TJP2Q9UDY2 1190 aa9.58□□□□□ -0.88
CTNNA1-221ENST00000520339 KLK13Q9UKR3 277 aa9.58□□□□□ -0.88
CTNNA1-221ENST00000520339 PCOLCE2Q9UKZ9 415 aa9.58□□□□□ -0.88
CTNNA1-221ENST00000520339 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-221ENST00000520339 IGF2RP11717 2491 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 TARSL2A2RTX5 802 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 TYW5A2RUC4 315 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 CAPN9O14815 690 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 THAP12O43422 761 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 SIN3BO75182 1162 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 LUC7L3O95232 432 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 CER1O95813 267 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 TRUB2O95900 331 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 MOCS2O96007 188 aaPredicted RBP9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 GHRHP01286 108 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 APOEP02649 317 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 GLI1P08151 1106 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 MX2P20592 715 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 TACR2P21452 398 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 CD27P26842 260 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 RDXP35241 583 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 MATKP42679 507 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 CSNK1EP49674 416 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 AFF3P51826 1226 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 ST8SIA6P61647 398 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 YWHAZP63104 245 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 APBA1Q02410 837 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 PDCLQ13371 301 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 CDH18Q13634 790 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 PCSK7Q16549 785 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 TTC31Q49AM3 519 aaPredicted RBP9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 PITRM1Q5JRX3 1037 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 TRIM65Q6PJ69 517 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 GBP6Q6ZN66 633 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 USP30Q70CQ3 517 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 APCDD1Q8J025 514 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 LGI2Q8N0V4 545 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 SHC3Q92529 594 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 BIRC7Q96CA5 298 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 BTN2A3PQ96KV6 586 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 SLC2A13Q96QE2 648 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 PRMT1Q99873 361 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 RASSF4Q9H2L5 321 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 ACBD3Q9H3P7 528 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 TM9SF3Q9HD45 589 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 TM7SF3Q9NS93 570 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 FBXL12Q9NXK8 326 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 SLCO3A1Q9UIG8 710 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 SCML1Q9UN30 329 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 ERVW-1Q9UQF0 538 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 PCDHGB7Q9Y5F8 929 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 PCDHGB2Q9Y5G2 931 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 SNX11Q9Y5W9 270 aa9.57□□□□□ -0.88
CTNNA1-221ENST00000520339 NUP205Q92621 2012 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 GTPBP10A4D1E9 387 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 TTC34A8MYJ7 566 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 MID1O15344 667 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 FSBPO95073 299 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 CAPNS1P04632 268 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 IGHV4-34P06331 123 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 SRPRAP08240 638 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 FTH1P19P0C7X4 201 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 PON1P27169 355 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 GRIA4P48058 902 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 GALCP54803 685 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 UBE2HP62256 183 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 ATP11AP98196 1134 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 CDK17Q00537 523 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 ECT2LQ008S8 904 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 CST6Q15828 149 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 CAMK4Q16566 473 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 ARHGAP44Q17R89 818 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 EXOC3L4Q17RC7 722 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 RAP1GAP2Q684P5 730 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 KIAA0895LQ68EN5 471 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 SLCO6A1Q86UG4 719 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 CHSY1Q86X52 802 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 CCDC117Q8IWD4 279 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 DHX40Q8IX18 779 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 DEFB106AQ8N104 65 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 PNPLA1Q8N8W4 532 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 ATP6V0D2Q8N8Y2 350 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 BAHD1Q8TBE0 780 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 SETD7Q8WTS6 366 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 SNX19Q92543 992 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 PPP1R13BQ96KQ4 1090 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 CPXM1Q96SM3 734 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 RBSNQ9H1K0 784 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 NEUROG2Q9H2A3 272 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 SIX2Q9NPC8 291 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 ASNSD1Q9NWL6 643 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 APEX2Q9UBZ4 518 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 SERGEFQ9UGK8 458 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 SLC12A6Q9UHW9 1150 aa9.56□□□□□ -0.88
CTNNA1-221ENST00000520339 NCKAP1Q9Y2A7 1128 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms