RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ALG10Q5BKT4 473 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 ARL13AQ5H913 290 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 ALG10BQ5I7T1 473 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 WDR45BQ5MNZ6 344 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 PIK3CD-AS1Q5SR53 167 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 FAM171A1Q5VUB5 890 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 NAA35Q5VZE5 725 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 SHC4Q6S5L8 630 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 CPOQ8IVL8 374 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 FAM185AQ8N0U4 392 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 ARFGAP1Q8N6T3 406 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZNF366Q8N895 744 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 C2CD4CQ8TF44 421 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 SMG7Q92540 1137 aaKnown RBP3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 CENPIQ92674 756 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 KAT2AQ92830 837 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 SIN3AQ96ST3 1273 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 NPLQ9BXD5 320 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 C1QTNF7Q9BXJ2 289 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 TASP1Q9H6P5 420 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 ACTR5Q9H9F9 607 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 IL21RQ9HBE5 538 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 Q9N2J8 555 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 SPAG4Q9NPE6 437 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 THSD1Q9NS62 852 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 RNF146Q9NTX7 359 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 SAGE1Q9NXZ1 904 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 RRN3Q9NYV6 651 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 SLC13A4Q9UKG4 626 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 FBXO4Q9UKT5 387 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 PTPRKQ15262 1439 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 AKNAQ7Z591 1439 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 MIA2Q96PC5 1412 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 COL3A1P02461 1466 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 GRIN2BQ13224 1484 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 TCOF1Q13428 1488 aaKnown RBP3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 GAPVD1Q14C86 1478 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 NCOA2Q15596 1464 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 URB2Q14146 1524 aaKnown RBP3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 THOC2Q8NI27 1593 aaKnown RBP3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 TCRBV7S3A2A0A539 114 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 RRN3P2A6NIE6 340 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 ADAM10O14672 748 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 KLK10O43240 276 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 KIF1CO43896 1103 aaKnown RBP3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 HBP1O60381 514 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 MOSPD3O75425 235 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 POLR1AO95602 1720 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 WEE2P0C1S8 567 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 SLC16A2P36021 539 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 SKIV2L2P42285 1042 aaKnown RBP3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 ME1P48163 572 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 NAIPQ13075 1403 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 TRPC3Q13507 836 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 KLF9Q13886 244 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 BYSLQ13895 437 aaKnown RBP3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 TWIST1Q15672 202 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 SMTNL2Q2TAL5 461 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 FHOD3Q2V2M9 1422 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 SAMD9Q5K651 1589 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 C6orf10Q5SRN2 563 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 MYOM3Q5VTT5 1437 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 TMEM268Q5VZI3 342 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 ATG16L1Q676U5 607 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 C11orf87Q6NUJ2 197 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 AAGABQ6PD74 315 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 RNF144BQ7Z419 303 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 KDELC2Q7Z4H8 507 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 C1QL2Q7Z5L3 287 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 CERS3Q8IU89 383 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 TDRD9Q8NDG6 1382 aaKnown RBP3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 CFAP43Q8NDM7 1665 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 HDAC7Q8WUI4 952 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 ABCA5Q8WWZ7 1642 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 MAELQ96JY0 434 aaKnown RBP3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 TEFMQ96QE5 360 aaKnown RBP3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 CD180Q99467 661 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 POLR3GLQ9BT43 218 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 IFT27Q9BW83 186 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 SLC29A3Q9BZD2 475 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 TAOK3Q9H2K8 898 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 STN1Q9H668 368 aaKnown RBP3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 TMEM160Q9NX00 188 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 MSRB1Q9NZV6 116 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 PDP2Q9P2J9 529 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 FBXO40Q9UH90 709 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 DHDHQ9UQ10 334 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 OSGIN2Q9Y236 505 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 AFG3L2Q9Y4W6 797 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 HS3ST3B1Q9Y662 390 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 SLC4A4Q9Y6R1 1079 aa3.57□□□□□ -1.84
HMGB1P41-201ENST00000520234 NESP48681 1621 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 CCDC18Q5T9S5 1454 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 ROCK1Q13464 1354 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 MTUS2Q5JR59 1369 aa3.56□□□□□ -1.84
HMGB1P41-201ENST00000520234 GAGE12JA6NER3 117 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms