RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 PDFQ9HBH1 243 aa9.67□□□□□ -0.86
CLN8-203ENST00000518780 FBRSL1Q9HCM7 1045 aaKnown RBP9.67□□□□□ -0.86
CLN8-203ENST00000518780 THAP10Q9P2Z0 257 aaPredicted RBP9.67□□□□□ -0.86
CLN8-203ENST00000518780 UBA2Q9UBT2 640 aaPredicted RBP9.67□□□□□ -0.86
CLN8-203ENST00000518780 SEPT3Q9UH03 358 aa9.67□□□□□ -0.86
CLN8-203ENST00000518780 SUN2Q9UH99 717 aa9.67□□□□□ -0.86
CLN8-203ENST00000518780 TRHDEQ9UKU6 1024 aa9.67□□□□□ -0.86
CLN8-203ENST00000518780 ERVW-1Q9UQF0 538 aa9.67□□□□□ -0.86
CLN8-203ENST00000518780 KIF26AQ9ULI4 1882 aaPredicted RBP9.67□□□□□ -0.86
CLN8-203ENST00000518780 PRUNE2Q8WUY3 3088 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 TARSL2A2RTX5 802 aaKnown RBP9.66□□□□□ -0.86
CLN8-203ENST00000518780 KRBA1A5PL33 1030 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 SHISA7A6NL88 538 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 CHURC1-FNTBB4DL54 471 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 PRRT4C9JH25 899 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 H7C0C1 242 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 K7EQS6 105 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 TRIM24O15164 1050 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 ZNF185O15231 689 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 LIASO43766 372 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 ATP9BO43861 1147 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 ITGAVP06756 1048 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 CCNB1P14635 433 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 PECAM1P16284 738 aaPredicted RBP9.66□□□□□ -0.86
CLN8-203ENST00000518780 CHRNA3P32297 505 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 KIR2DL1P43626 348 aaPredicted RBP9.66□□□□□ -0.86
CLN8-203ENST00000518780 MAPK8P45983 427 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 RPS9P46781 194 aaKnown RBP9.66□□□□□ -0.86
CLN8-203ENST00000518780 ATP5OP48047 213 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 CSNK1DP48730 415 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 FNTAP49354 379 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 SERPINH1P50454 418 aaKnown RBP9.66□□□□□ -0.86
CLN8-203ENST00000518780 ARF5P84085 180 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 KDSRQ06136 332 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 AP1B1Q10567 949 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 LLGL1Q15334 1064 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 SIX1Q15475 284 aaPredicted RBP9.66□□□□□ -0.86
CLN8-203ENST00000518780 TMEM215Q68D42 235 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 HEATR6Q6AI08 1181 aaKnown RBP9.66□□□□□ -0.86
CLN8-203ENST00000518780 DARS2Q6PI48 645 aaKnown RBP9.66□□□□□ -0.86
CLN8-203ENST00000518780 NPNTQ6UXI9 565 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 C4orf22Q6V702 233 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 MAMSTRQ6ZN01 415 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 TRIM67Q6ZTA4 783 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 SIX5Q8N196 739 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 ZNF687Q8N1G0 1237 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 SH2D3CQ8N5H7 860 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 TEX26Q8N6G2 289 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 PCDH20Q8N6Y1 951 aaKnown RBP9.66□□□□□ -0.86
CLN8-203ENST00000518780 ZNF513Q8N8E2 541 aaPredicted RBP9.66□□□□□ -0.86
CLN8-203ENST00000518780 PRELID2Q8N945 189 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 ATL2Q8NHH9 583 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 GRK7Q8WTQ7 553 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 HTR3CQ8WXA8 447 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 MS4A14Q96JA4 679 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 CCDC114Q96M63 670 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 PSKH2Q96QS6 385 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 LGMNQ99538 433 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 FBRSQ9HAH7 460 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 LTB4R2Q9NPC1 389 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 SAE1Q9UBE0 346 aaPredicted RBP9.66□□□□□ -0.86
CLN8-203ENST00000518780 CA14Q9ULX7 337 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 MFHAS1Q9Y4C4 1052 aa9.66□□□□□ -0.86
CLN8-203ENST00000518780 FARP1Q9Y4F1 1045 aaPredicted RBP9.66□□□□□ -0.86
CLN8-203ENST00000518780 TCRBV7S2A1N4TA0A589 114 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 C5orf60A6NFR6 353 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 FAM170BA6NMN3 283 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 J3KR12 359 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 SNAP91O60641 907 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 PHF2O75151 1096 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 NEBLO76041 1014 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 PEX11BO96011 259 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 EGFP01133 1207 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 CHRNB1P11230 501 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 NTSR1P30989 418 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 TUBB4BP68371 445 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 LBRQ14739 615 aaKnown RBP9.65□□□□□ -0.86
CLN8-203ENST00000518780 GRM3Q14832 879 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 OASLQ15646 514 aaKnown RBP9.65□□□□□ -0.86
CLN8-203ENST00000518780 PTPRNQ16849 979 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 TEX44Q53QW1 395 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 EOGTQ5NDL2 527 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 DNTTIP2Q5QJE6 756 aaKnown RBP9.65□□□□□ -0.86
CLN8-203ENST00000518780 SYDE1Q6ZW31 735 aaPredicted RBP9.65□□□□□ -0.86
CLN8-203ENST00000518780 ZC3H18Q86VM9 953 aaKnown RBP9.65□□□□□ -0.86
CLN8-203ENST00000518780 CEP112Q8N8E3 955 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 ATP11CQ8NB49 1132 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 CCHCR1Q8TD31 782 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 USP33Q8TEY7 942 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 SLCO2A1Q92959 643 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 MAGOHBQ96A72 148 aaKnown RBP9.65□□□□□ -0.86
CLN8-203ENST00000518780 CLDN23Q96B33 292 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 RTP4Q96DX8 246 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 LRIG1Q96JA1 1093 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 CAPZA3Q96KX2 299 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 MRGPRX3Q96LB0 322 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 NECAB3Q96P71 396 aaPredicted RBP9.65□□□□□ -0.86
CLN8-203ENST00000518780 IL12RB2Q99665 862 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 TMEM245Q9H330 911 aa9.65□□□□□ -0.86
CLN8-203ENST00000518780 TBC1D17Q9HA65 648 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms