RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 DIS3LQ8TF46 1054 aaKnown RBP27.02■■□□□ 1.92
COL13A1-210ENST00000517713 PPM1EQ8WY54 764 aa27.02■■□□□ 1.92
COL13A1-210ENST00000517713 PEX11BO96011 259 aa27.02■■□□□ 1.92
COL13A1-210ENST00000517713 ITGA2BP08514 1039 aa27.02■■□□□ 1.92
COL13A1-210ENST00000517713 NEFHP12036 1026 aa27.02■■□□□ 1.92
COL13A1-210ENST00000517713 MTA1Q13330 715 aa27.02■■□□□ 1.92
COL13A1-210ENST00000517713 MICALL1Q8N3F8 863 aa27.02■■□□□ 1.92
COL13A1-210ENST00000517713 PTPRN2Q92932 1015 aa27.02■■□□□ 1.92
COL13A1-210ENST00000517713 FATE1Q969F0 183 aa27.02■■□□□ 1.92
COL13A1-210ENST00000517713 RPRD1AQ96P16 312 aaPredicted RBP27.02■■□□□ 1.92
COL13A1-210ENST00000517713 CLSTN3Q9BQT9 956 aa27.02■■□□□ 1.92
COL13A1-210ENST00000517713 FICDQ9BVA6 458 aa27.02■■□□□ 1.92
COL13A1-210ENST00000517713 HBS1LQ9Y450 684 aaKnown RBP27.02■■□□□ 1.92
COL13A1-210ENST00000517713 RENBPP51606 427 aa27.01■■□□□ 1.91
COL13A1-210ENST00000517713 HNRNPDQ14103 355 aaKnown RBP27.01■■□□□ 1.91
COL13A1-210ENST00000517713 THOC1Q96FV9 657 aaKnown RBP27.01■■□□□ 1.91
COL13A1-210ENST00000517713 AFF4Q9UHB7 1163 aaKnown RBP27.01■■□□□ 1.91
COL13A1-210ENST00000517713 GGT7Q9UJ14 662 aa27.01■■□□□ 1.91
COL13A1-210ENST00000517713 DNMT3LQ9UJW3 386 aa27.01■■□□□ 1.91
COL13A1-210ENST00000517713 ALDOAP04075 364 aaKnown RBP27■■□□□ 1.91
COL13A1-210ENST00000517713 ATP5C1P36542 298 aaKnown RBP27■■□□□ 1.91
COL13A1-210ENST00000517713 NADSYN1Q6IA69 706 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 PDZD8Q8NEN9 1154 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 TOP1MTQ969P6 601 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 ZNF512Q96ME7 567 aaPredicted RBP27■■□□□ 1.91
COL13A1-210ENST00000517713 KIFC1Q9BW19 673 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 ZNF212Q9UDV6 495 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 COL4A6Q14031 1691 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 J3KR12 359 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 SEC24AO95486 1093 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 SOD2P04179 222 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 RFC2P35250 354 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 ADRA1AP35348 466 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 SCTRP47872 440 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 TEDDM1Q5T9Z0 273 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 ARMC2Q8NEN0 867 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 OVCA2Q8WZ82 227 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 RMDN2Q96LZ7 410 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 ENTPD7Q9NQZ7 604 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 HAUS2Q9NVX0 235 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 CAPN7Q9Y6W3 813 aa27■■□□□ 1.91
COL13A1-210ENST00000517713 TPP1O14773 563 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 BGNP21810 368 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 NMBRP28336 390 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 KCNQ1P51787 676 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 PDE1BQ01064 536 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 PCID2Q5JVF3 399 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 SNX30Q5VWJ9 437 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 DENND5AQ6IQ26 1287 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 KCNMB4Q86W47 210 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 ZNF461Q8TAF7 563 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 SP110Q9HB58 689 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 C20orf96Q9NUD7 363 aaPredicted RBP26.99■■□□□ 1.91
COL13A1-210ENST00000517713 PMPCBO75439 489 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 CLTBP09497 229 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 TACR2P21452 398 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 HSP90AA5PQ58FG0 334 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 MARC1Q5VT66 337 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 FYB2Q5VWT5 728 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 STRA8Q7Z7C7 330 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 CIR1Q86X95 450 aaPredicted RBP26.99■■□□□ 1.91
COL13A1-210ENST00000517713 ZNF354CQ86Y25 554 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 ZNF689Q96CS4 500 aaPredicted RBP26.99■■□□□ 1.91
COL13A1-210ENST00000517713 AGAP2Q99490 1192 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 FSD1LQ9BXM9 530 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 SLC25A51Q9H1U9 297 aa26.99■■□□□ 1.91
COL13A1-210ENST00000517713 ABLIM3O94929 683 aa26.98■■□□□ 1.91
COL13A1-210ENST00000517713 POLD3Q15054 466 aaPredicted RBP26.98■■□□□ 1.91
COL13A1-210ENST00000517713 PSMG2Q969U7 264 aa26.98■■□□□ 1.91
COL13A1-210ENST00000517713 MRGPRX2Q96LB1 330 aa26.98■■□□□ 1.91
COL13A1-210ENST00000517713 ZNF558Q96NG5 402 aa26.98■■□□□ 1.91
COL13A1-210ENST00000517713 RBBP8Q99708 897 aa26.98■■□□□ 1.91
COL13A1-210ENST00000517713 TSSK1BQ9BXA7 367 aa26.98■■□□□ 1.91
COL13A1-210ENST00000517713 NACA2Q9H009 215 aa26.98■■□□□ 1.91
COL13A1-210ENST00000517713 RXFP1Q9HBX9 757 aa26.98■■□□□ 1.91
COL13A1-210ENST00000517713 HSFX1Q9UBD0 423 aa26.98■■□□□ 1.91
COL13A1-210ENST00000517713 ABHD14A-ACY1A0A1B0GW23 586 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 RAMP2O60895 175 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 GSTA1P08263 222 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 SPRP35270 261 aaPredicted RBP26.97■■□□□ 1.91
COL13A1-210ENST00000517713 MPP3Q13368 585 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 FAM133BQ5BKY9 247 aaKnown RBP26.97■■□□□ 1.91
COL13A1-210ENST00000517713 PKN3Q6P5Z2 889 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 CCDC117Q8IWD4 279 aaPredicted RBP26.97■■□□□ 1.91
COL13A1-210ENST00000517713 GBP7Q8N8V2 638 aaPredicted RBP26.97■■□□□ 1.91
COL13A1-210ENST00000517713 PABPC5Q96DU9 382 aaKnown RBP26.97■■□□□ 1.91
COL13A1-210ENST00000517713 MYEOVQ96EZ4 313 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 RASSF4Q9H2L5 321 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 NT5MQ9NPB1 228 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 SLC12A4Q9UP95 1085 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 USH1CQ9Y6N9 552 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 ZNF840PA6NDX5 716 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 KLF11O14901 512 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 UBOX5O94941 541 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 OR1E1P30953 314 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 MAPKAPK2P49137 400 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 DSG1Q02413 1049 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 SLC10A7Q0GE19 358 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 PDE1CQ14123 709 aaPredicted RBP26.97■■□□□ 1.91
COL13A1-210ENST00000517713 PARP15Q460N3 678 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms