RNA–Protein interactions for RNA: ENST00000515697.5

FAM200B-222, Transcript of family with sequence similarity 200 member B, human

TSL 3

Gene FAM200B, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM200B-222	ENST00000515697	PLRG1	O43660	514 aa	Known RBP	20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	RTN2	O75298	545 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	ZNF821	O75541	412 aa	Predicted RBP	20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	WNT1	P04628	370 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	SPINK2	P20155	84 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	RRM1	P23921	792 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	RFC1	P35251	1148 aa	Predicted RBP	20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	CLCN6	P51797	869 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	C1QBP	Q07021	282 aa	Known RBP	20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	CNTN1	Q12860	1018 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	TRIP6	Q15654	476 aa	Known RBP	20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	CDO1	Q16878	200 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	FAM46C	Q5VWP2	391 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	WDR59	Q6PJI9	974 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	IRF2BP2	Q7Z5L9	587 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	GLRX5	Q86SX6	157 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	NLRP14	Q86W24	1093 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	PIP4K2C	Q8TBX8	421 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	FUCA2	Q9BTY2	467 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	SCNM1	Q9BWG6	230 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	MAGEB5	Q9BZ81	275 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	KDM4C	Q9H3R0	1056 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	RTN4	Q9NQC3	1192 aa	Known RBP	20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	ARHGAP20	Q9P2F6	1191 aa		20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	TPX2	Q9ULW0	747 aa	Known RBP	20.69	■□□□□ 0.9
FAM200B-222	ENST00000515697	SIGLEC16	A6NMB1	481 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	FAM72C	H0Y354	149 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	RNF103	O00237	685 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	CALB1	P05937	261 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	KRT3	P12035	628 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	TAS2R38	P59533	333 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	PPP1R15B	Q5SWA1	713 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	FAM72A	Q5TYM5	149 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	FAM72D	Q6L9T8	149 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	LRSAM1	Q6UWE0	723 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	LINGO4	Q6UY18	593 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	FAM72B	Q86X60	149 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	CCDC185	Q8N715	623 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	ATP11C	Q8NB49	1132 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	FAM172A	Q8WUF8	416 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	NTAN1	Q96AB6	310 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	NAT10	Q9H0A0	1025 aa	Known RBP	20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	RETREG1	Q9H6L5	497 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	OR12D3	Q9UGF7	316 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	MYO6	Q9UM54	1294 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	PTPRB	P23467	1997 aa		20.68	■□□□□ 0.9
FAM200B-222	ENST00000515697	C1QTNF3-AMACR	E9PGA6	284 aa		20.67	■□□□□ 0.9
FAM200B-222	ENST00000515697		H0Y8X5	98 aa		20.67	■□□□□ 0.9
FAM200B-222	ENST00000515697	CD160	O95971	181 aa		20.67	■□□□□ 0.9
FAM200B-222	ENST00000515697	GNA12	Q03113	381 aa		20.67	■□□□□ 0.9
FAM200B-222	ENST00000515697	SCAP	Q12770	1279 aa		20.67	■□□□□ 0.9
FAM200B-222	ENST00000515697	PIP5KL1	Q5T9C9	394 aa		20.67	■□□□□ 0.9
FAM200B-222	ENST00000515697	C22orf39	Q6P5X5	142 aa		20.67	■□□□□ 0.9
FAM200B-222	ENST00000515697	RAB44	Q7Z6P3	723 aa	Predicted RBP	20.67	■□□□□ 0.9
FAM200B-222	ENST00000515697	TRIM69	Q86WT6	500 aa		20.67	■□□□□ 0.9
FAM200B-222	ENST00000515697	TMIE	Q8NEW7	156 aa		20.67	■□□□□ 0.9
FAM200B-222	ENST00000515697	GATA6	Q92908	595 aa		20.67	■□□□□ 0.9
FAM200B-222	ENST00000515697	ACE2	Q9BYF1	805 aa	Predicted RBP	20.67	■□□□□ 0.9
FAM200B-222	ENST00000515697	NDFIP2	Q9NV92	336 aa		20.67	■□□□□ 0.9
FAM200B-222	ENST00000515697	DMXL2	Q8TDJ6	3036 aa		20.67	■□□□□ 0.9
FAM200B-222	ENST00000515697	PLXNB3	Q9ULL4	1909 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	TRPM6	Q9BX84	2022 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	CFAP47	Q6ZTR5	3102 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	FREM2	Q5SZK8	3169 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	CXorf51A	A0A1B0GTR3	108 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	FAM221B	A6H8Z2	402 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	KCNK3	O14649	394 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	FLRT2	O43155	660 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	HYAL3	O43820	417 aa	Predicted RBP	20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	PCDHGA12	O60330	932 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	LRIG2	O94898	1065 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	FER	P16591	822 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	GPD1	P21695	349 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	CHRNA3	P32297	505 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	SERPINH1	P50454	418 aa	Known RBP	20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	ARF5	P84085	180 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	ARL13B	Q3SXY8	428 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	POM121L1P	Q3SYA9	428 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	CHST14	Q8NCH0	376 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	SELENOO	Q9BVL4	669 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	TMEM248	Q9NWD8	314 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	BTBD3	Q9Y2F9	522 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	NEUROG3	Q9Y4Z2	214 aa		20.66	■□□□□ 0.9
FAM200B-222	ENST00000515697	TBC1D3D	A0A087WVF3	549 aa		20.65	■□□□□ 0.9
FAM200B-222	ENST00000515697	TBC1D3I	A0A087WXS9	549 aa		20.65	■□□□□ 0.9
FAM200B-222	ENST00000515697	TBC1D3E	A0A087X179	549 aa		20.65	■□□□□ 0.9
FAM200B-222	ENST00000515697	TBC1D3K	A0A087X1G2	549 aa		20.65	■□□□□ 0.9
FAM200B-222	ENST00000515697	TBC1D3F	A6NER0	549 aa	Predicted RBP	20.65	■□□□□ 0.9
FAM200B-222	ENST00000515697	TBC1D3L	B9A6J9	549 aa		20.65	■□□□□ 0.9
FAM200B-222	ENST00000515697	DKK1	O94907	266 aa		20.65	■□□□□ 0.9
FAM200B-222	ENST00000515697	TRIM16	O95361	564 aa		20.65	■□□□□ 0.9
FAM200B-222	ENST00000515697	PLEK	P08567	350 aa	Predicted RBP	20.65	■□□□□ 0.9
FAM200B-222	ENST00000515697	TBC1D3H	P0C7X1	549 aa		20.65	■□□□□ 0.9
FAM200B-222	ENST00000515697	FTH1P19	P0C7X4	201 aa		20.65	■□□□□ 0.9
FAM200B-222	ENST00000515697	RHOQ	P17081	205 aa		20.65	■□□□□ 0.9
FAM200B-222	ENST00000515697	CD38	P28907	300 aa		20.65	■□□□□ 0.9
FAM200B-222	ENST00000515697	MAPKAPK2	P49137	400 aa		20.65	■□□□□ 0.9
FAM200B-222	ENST00000515697	ZNF143	P52747	638 aa	Predicted RBP	20.65	■□□□□ 0.9
FAM200B-222	ENST00000515697	SLC20A2	Q08357	652 aa		20.65	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms