RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 VANGL2Q9ULK5 521 aa16.16■□□□□ 0.18
LMNA-223ENST00000515459 HS3ST2Q9Y278 367 aa16.16■□□□□ 0.18
LMNA-223ENST00000515459 OR51B4Q9Y5P0 310 aa16.16■□□□□ 0.18
LMNA-223ENST00000515459 MGAQ8IWI9 3026 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 CLDN11O75508 207 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 CTSLP07711 333 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 SRCP12931 536 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 CHRNA3P32297 505 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 DUSP3P51452 185 aaPredicted RBP16.15■□□□□ 0.18
LMNA-223ENST00000515459 IRAK1P51617 712 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 KRT83P78385 493 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 TAF5Q15542 800 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 ZNF284Q2VY69 593 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 DEFB106AQ8N104 65 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 FAM181AQ8N9Y4 354 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 SPATA20Q8TB22 786 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 FAM174AQ8TBP5 190 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 ZNF606Q8WXB4 792 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 SMARCE1Q969G3 411 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 DHTKD1Q96HY7 919 aaPredicted RBP16.15■□□□□ 0.18
LMNA-223ENST00000515459 DUSP23Q9BVJ7 150 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 DPH1Q9BZG8 443 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 MUC3BQ9H195 1237 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 OSBPL2Q9H1P3 480 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 DYRK4Q9NR20 520 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 THSD1Q9NS62 852 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 TBC1D30Q9Y2I9 924 aa16.15■□□□□ 0.18
LMNA-223ENST00000515459 COL6A6A6NMZ7 2263 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 SCAMP1O15126 338 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 KLK10O43240 276 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 THAP12O43422 761 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 PCDH8O95206 1070 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 GLI1P08151 1106 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 MYF5P13349 255 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 CLDN2P57739 230 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 HNRNPKP61978 463 aaKnown RBP eCLIP16.14■□□□□ 0.17
LMNA-223ENST00000515459 PDCLQ13371 301 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 ABI3BPQ7Z7G0 1075 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 FMR1NBQ8N0W7 255 aaPredicted RBP16.14■□□□□ 0.17
LMNA-223ENST00000515459 SLC22A18ASQ8N1D0 253 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 ATP11CQ8NB49 1132 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 TMIEQ8NEW7 156 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 OR2A12Q8NGT7 310 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 MAPK15Q8TD08 544 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 ARRDC3Q96B67 414 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 NOX5Q96PH1 765 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 SLC2A13Q96QE2 648 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 CAAP1Q9H8G2 361 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 GDPD2Q9HCC8 539 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 ASCL3Q9NQ33 180 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 DNAJC28Q9NX36 388 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 TENM4Q6N022 2769 aa16.14■□□□□ 0.17
LMNA-223ENST00000515459 TRPM6Q9BX84 2022 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 LY6G6EA0A0G2JKS1 128 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 A6NNZ2 444 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 K7ESM1 405 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 HSF2BPO75031 334 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 MT-CO1P00395 513 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 PRNPP04156 253 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 GNA15P30679 374 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 CDH4P55283 916 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 VAC14Q08AM6 782 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 ISXQ2M1V0 245 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 EFHC1Q5JVL4 640 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 IGF2-ASQ6U949 168 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 GCNT7Q6ZNI0 430 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 Q6ZSR6 202 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 ERN2Q76MJ5 926 aaKnown RBP16.13■□□□□ 0.17
LMNA-223ENST00000515459 DCP2Q8IU60 420 aaKnown RBP16.13■□□□□ 0.17
LMNA-223ENST00000515459 IFI44Q8TCB0 444 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 SNRNP27Q8WVK2 155 aaKnown RBP16.13■□□□□ 0.17
LMNA-223ENST00000515459 VCPIP1Q96JH7 1222 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 C2orf49Q9BVC5 232 aaPredicted RBP16.13■□□□□ 0.17
LMNA-223ENST00000515459 ASNSD1Q9NWL6 643 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 ZFR2Q9UPR6 939 aaKnown RBP16.13■□□□□ 0.17
LMNA-223ENST00000515459 HS3ST4Q9Y661 456 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 HS3ST3A1Q9Y663 406 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 U3KQA8 63 aa16.13■□□□□ 0.17
LMNA-223ENST00000515459 ATMQ13315 3056 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 LZTS3O60299 673 aaPredicted RBP16.12■□□□□ 0.17
LMNA-223ENST00000515459 PAGE1O75459 146 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 NEBLO76041 1014 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 GGCXP38435 758 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 PPP1R2P41236 205 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 NME3Q13232 169 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 LY6DQ14210 128 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 C5orf22Q49AR2 442 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 ZNF542PQ5EBM4 170 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 C3orf38Q5JPI3 329 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 SEL1L3Q68CR1 1132 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 ZCCHC8Q6NZY4 707 aaKnown RBP16.12■□□□□ 0.17
LMNA-223ENST00000515459 PTAR1Q7Z6K3 402 aaPredicted RBP16.12■□□□□ 0.17
LMNA-223ENST00000515459 TTC9Q92623 222 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 GRAMD1AQ96CP6 724 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 PPP1R16AQ96I34 528 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 HDAC8Q9BY41 377 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 SEMA4CQ9C0C4 833 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 INTS2Q9H0H0 1204 aaKnown RBP16.12■□□□□ 0.17
LMNA-223ENST00000515459 SIK2Q9H0K1 926 aa16.12■□□□□ 0.17
LMNA-223ENST00000515459 UBE2TQ9NPD8 197 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms