RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-215ENST00000515008 ATP1A3P13637 1013 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 FERP16591 822 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 MAPKAPK2P49137 400 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 GNA12Q03113 381 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 SLC20A2Q08357 652 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 SLC45A4Q5BKX6 768 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 AGBL4Q5VU57 503 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 PPP1R2P3Q6NXS1 205 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 C22orf39Q6P5X5 142 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 TRIM69Q86WT6 500 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 TMIEQ8NEW7 156 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 BAHD1Q8TBE0 780 aaPredicted RBP18.08■□□□□ 0.48
SIL1-215ENST00000515008 SETD7Q8WTS6 366 aaKnown RBP18.08■□□□□ 0.48
SIL1-215ENST00000515008 NTAN1Q96AB6 310 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 CDC6Q99741 560 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 AGPAT1Q99943 283 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 CEP44Q9C0F1 390 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 PREBQ9HCU5 417 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 ATP13A1Q9HD20 1204 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 AASDHPPTQ9NRN7 309 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 SEPT11Q9NVA2 429 aaKnown RBP18.08■□□□□ 0.48
SIL1-215ENST00000515008 OR12D3Q9UGF7 316 aa18.08■□□□□ 0.48
SIL1-215ENST00000515008 USP24Q9UPU5 2620 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 TBC1D3DA0A087WVF3 549 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 TBC1D3IA0A087WXS9 549 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 TBC1D3EA0A087X179 549 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 TBC1D3KA0A087X1G2 549 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 TBC1D3FA6NER0 549 aaPredicted RBP18.07■□□□□ 0.48
SIL1-215ENST00000515008 SIGLEC16A6NMB1 481 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 TBC1D3LB9A6J9 549 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 YKT6O15498 198 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 PRNPP04156 253 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 TBC1D3HP0C7X1 549 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 RHOQP17081 205 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 GPD1P21695 349 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 RRM1P23921 792 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 CD38P28907 300 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 CHRNA3P32297 505 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 RECQLP46063 649 aaPredicted RBP18.07■□□□□ 0.48
SIL1-215ENST00000515008 SERPINH1P50454 418 aaKnown RBP18.07■□□□□ 0.48
SIL1-215ENST00000515008 METAP1P53582 386 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 PPP2CBP62714 309 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 PPP2CAP67775 309 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 SCAPQ12770 1279 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 CNTN1Q12860 1018 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 INAVAQ3KP66 663 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 TBC1D3GQ6DHY5 549 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 TBC1D3CQ6IPX1 549 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 NAPEPLDQ6IQ20 393 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 LAYNQ6UX15 382 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 UNQ6494/PRO21346Q6UXR6 183 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 PRPF39Q86UA1 669 aaKnown RBP18.07■□□□□ 0.48
SIL1-215ENST00000515008 TBC1D3Q8IZP1 549 aaPredicted RBP18.07■□□□□ 0.48
SIL1-215ENST00000515008 OR7D4Q8NG98 312 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 OR2A12Q8NGT7 310 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 FAM172AQ8WUF8 416 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 SERAC1Q96JX3 654 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 EBF2Q9HAK2 575 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 DMTF1Q9Y222 760 aa18.07■□□□□ 0.48
SIL1-215ENST00000515008 APOBEC2Q9Y235 224 aaKnown RBP18.07■□□□□ 0.48
SIL1-215ENST00000515008 KMT2BQ9UMN6 2715 aaPredicted RBP18.07■□□□□ 0.48
SIL1-215ENST00000515008 A0A1W2PR77 199 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 ANKRD62A6NC57 917 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 TMEM8BA6NDV4 472 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 H0Y8X5 98 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 CBX4O00257 560 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 HYAL3O43820 417 aaPredicted RBP18.06■□□□□ 0.48
SIL1-215ENST00000515008 BNIP3LO60238 219 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 RTN2O75298 545 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 ZMPSTE24O75844 475 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 PROS1P07225 676 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 FTH1P19P0C7X4 201 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 RFC1P35251 1148 aaPredicted RBP18.06■□□□□ 0.48
SIL1-215ENST00000515008 GRK6P43250 576 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 HDAC4P56524 1084 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 FILIP1LQ4L180 1135 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 DNAJC24Q6P3W2 148 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 LINGO4Q6UY18 593 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 RAB44Q7Z6P3 723 aaPredicted RBP18.06■□□□□ 0.48
SIL1-215ENST00000515008 PHLDB2Q86SQ0 1253 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 DRC7Q8IY82 874 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 PCDH20Q8N6Y1 951 aaKnown RBP18.06■□□□□ 0.48
SIL1-215ENST00000515008 ADAMTS14Q8WXS8 1223 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 TBC1D31Q96DN5 1066 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 SPON2Q9BUD6 331 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 RTN4Q9NQC3 1192 aaKnown RBP18.06■□□□□ 0.48
SIL1-215ENST00000515008 DYRK4Q9NR20 520 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 TMEM248Q9NWD8 314 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 MSRB2Q9Y3D2 182 aa18.06■□□□□ 0.48
SIL1-215ENST00000515008 A0A1B0GTQ1 180 aa18.05■□□□□ 0.48
SIL1-215ENST00000515008 TCRBV5S1A1TA0A578 114 aa18.05■□□□□ 0.48
SIL1-215ENST00000515008 FAM221BA6H8Z2 402 aa18.05■□□□□ 0.48
SIL1-215ENST00000515008 K7ERQ8 282 aa18.05■□□□□ 0.48
SIL1-215ENST00000515008 PLK4O00444 970 aa18.05■□□□□ 0.48
SIL1-215ENST00000515008 SMAD6O43541 496 aaKnown RBP18.05■□□□□ 0.48
SIL1-215ENST00000515008 LRIG2O94898 1065 aa18.05■□□□□ 0.48
SIL1-215ENST00000515008 GJB6O95452 261 aa18.05■□□□□ 0.48
SIL1-215ENST00000515008 TOP3BO95985 862 aaKnown RBP18.05■□□□□ 0.48
SIL1-215ENST00000515008 CTSLP07711 333 aa18.05■□□□□ 0.48
SIL1-215ENST00000515008 PLEKP08567 350 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms