RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 CMKLR1Q99788 373 aa12.16□□□□□ -0.46
SMAD5-210ENST00000515005 DUSP16Q9BY84 665 aa12.16□□□□□ -0.46
SMAD5-210ENST00000515005 SPASTQ9UBP0 616 aa12.16□□□□□ -0.46
SMAD5-210ENST00000515005 IPO11Q9UI26 975 aaKnown RBP12.16□□□□□ -0.46
SMAD5-210ENST00000515005 HS3ST3A1Q9Y663 406 aa12.16□□□□□ -0.46
SMAD5-210ENST00000515005 DNHD1Q96M86 4753 aa12.16□□□□□ -0.46
SMAD5-210ENST00000515005 CSMD2Q7Z408 3487 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 LMO7DNF2Z398 122 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 STX6O43752 255 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 ANXA6P08133 673 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 HOXD13P35453 343 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 CASP4P49662 377 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 BIRC3Q13489 604 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 CDH18Q13634 790 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 PDE1CQ14123 709 aaPredicted RBP12.15□□□□□ -0.46
SMAD5-210ENST00000515005 DEFB109BQ30KR1 87 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 NADSYN1Q6IA69 706 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 ESRP1Q6NXG1 681 aaKnown RBP12.15□□□□□ -0.46
SMAD5-210ENST00000515005 BHLHA9Q7RTU4 235 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 KYQ8NBH2 561 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 HJURPQ8NCD3 748 aaPredicted RBP12.15□□□□□ -0.46
SMAD5-210ENST00000515005 FAM174AQ8TBP5 190 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 GPBAR1Q8TDU6 330 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 PDCD6IPQ8WUM4 868 aaKnown RBP12.15□□□□□ -0.46
SMAD5-210ENST00000515005 EDEM1Q92611 657 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 PMEPA1Q969W9 287 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 TCTN2Q96GX1 697 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 HEXIM2Q96MH2 286 aaKnown RBP12.15□□□□□ -0.46
SMAD5-210ENST00000515005 SIRPGQ9P1W8 387 aa12.15□□□□□ -0.46
SMAD5-210ENST00000515005 C1QTNF3-AMACRE9PGA6 284 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 IRAK2O43187 625 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 PCDH8O95206 1070 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 MOCS3O95396 460 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 VNN1O95497 513 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 LDLRP01130 860 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 CCL4P13236 92 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 IDEP14735 1019 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 OAS2P29728 719 aaKnown RBP12.14□□□□□ -0.47
SMAD5-210ENST00000515005 UGT1A3P35503 534 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 CDC20Q12834 499 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 NCOA4Q13772 614 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 TMEM259Q4ZIN3 620 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 RILPL1Q5EBL4 403 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 PPP1R26Q5T8A7 1209 aaPredicted RBP12.14□□□□□ -0.47
SMAD5-210ENST00000515005 TMEM164Q5U3C3 297 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 CFAP52Q8N1V2 620 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 LRRC61Q9BV99 259 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 SLC4A5Q9BY07 1137 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 IRX2Q9BZI1 471 aaPredicted RBP12.14□□□□□ -0.47
SMAD5-210ENST00000515005 B3GNT4Q9C0J1 378 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 CLPBQ9H078 707 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 CDH19Q9H159 772 aa12.14□□□□□ -0.47
SMAD5-210ENST00000515005 OLA1Q9NTK5 396 aaKnown RBP12.14□□□□□ -0.47
SMAD5-210ENST00000515005 APOBEC3BQ9UH17 382 aaKnown RBP12.14□□□□□ -0.47
SMAD5-210ENST00000515005 ERRFI1Q9UJM3 462 aaPredicted RBP12.14□□□□□ -0.47
SMAD5-210ENST00000515005 PNMA8BQ9ULN7 279 aaPredicted RBP12.14□□□□□ -0.47
SMAD5-210ENST00000515005 ZNF106Q9H2Y7 1883 aaKnown RBP12.14□□□□□ -0.47
SMAD5-210ENST00000515005 ACSL4O60488 711 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 LUC7L3O95232 432 aaKnown RBP12.13□□□□□ -0.47
SMAD5-210ENST00000515005 PAK4O96013 591 aaPredicted RBP12.13□□□□□ -0.47
SMAD5-210ENST00000515005 CELA2BP08218 269 aaPredicted RBP12.13□□□□□ -0.47
SMAD5-210ENST00000515005 NNMTP40261 264 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 ASPAP45381 313 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 RABIFP47224 123 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 MRPL49Q13405 166 aaKnown RBP12.13□□□□□ -0.47
SMAD5-210ENST00000515005 SEPT6Q14141 434 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 C16orf72Q14CZ0 275 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 RAB41Q5JT25 222 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 PHF19Q5T6S3 580 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 ASB18Q6ZVZ8 466 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 PIGZQ86VD9 579 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 CACNA2D3Q8IZS8 1091 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 ARL10Q8N8L6 244 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 Q8N9G6 341 aaPredicted RBP12.13□□□□□ -0.47
SMAD5-210ENST00000515005 FAM184AQ8NB25 1140 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 PRR7Q8TB68 274 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 PLEKHO2Q8TD55 490 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 RNF139Q8WU17 664 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 BTN2A2Q8WVV5 523 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 MARVELD3Q96A59 401 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 SLC45A3Q96JT2 553 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 RNF215Q9Y6U7 377 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 AKAP9Q99996 3911 aa12.13□□□□□ -0.47
SMAD5-210ENST00000515005 TNRC6AQ8NDV7 1962 aaKnown RBP12.12□□□□□ -0.47
SMAD5-210ENST00000515005 FRMD3A2A2Y4 597 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 MCF2LO15068 1137 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 ZBED1O96006 694 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 IGLV3-27P01718 113 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 CTSLP07711 333 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 P4HA1P13674 534 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 TSHRP16473 764 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 ZNF18P17022 549 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 SLC11A2P49281 568 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 CYP2J2P51589 502 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 TKTL1P51854 596 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 ACCSLQ4AC99 568 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 PM20D1Q6GTS8 502 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 SPOPLQ6IQ16 392 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 TCTN3Q6NUS6 607 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 CCNJLQ8IV13 435 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms