RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 MBLAC2Q68D91 279 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 RETSATQ6NUM9 610 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 TXNDC11Q6PKC3 985 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 CDKL3Q8IVW4 592 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 TP53INP2Q8IXH6 220 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 APCDD1Q8J025 514 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 ZNF687Q8N1G0 1237 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 TEX26Q8N6G2 289 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 CCDC26Q8TAB7 109 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 TFB1MQ8WVM0 346 aaKnown RBP12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 SLCO2A1Q92959 643 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 RTP4Q96DX8 246 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 SHDQ96IW2 340 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 VAT1Q99536 393 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 ARHGEF3Q9NR81 526 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 ELOVL2Q9NXB9 296 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 SAE1Q9UBE0 346 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 VPS51Q9UID3 782 aa12.23□□□□□ -0.45
PDLIM5-220ENST00000514830 PRRT4C9JH25 899 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 TRIM24O15164 1050 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 PHF2O75151 1096 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 CD160O95971 181 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 STIP1P31948 543 aaKnown RBP12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 CHRNA3P32297 505 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 SOX9P48436 509 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 ECT2LQ008S8 904 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 LMNB2Q03252 620 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 MESP2Q0VG99 397 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 ENPP2Q13822 863 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 IL31Q6EBC2 164 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 ZNF852Q6ZMS4 543 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 CCDC13Q8IYE1 715 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 SYNPOQ8N3V7 929 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 TTC8Q8TAM2 541 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 UCMAQ8WVF2 138 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 ISG20Q96AZ6 181 aaKnown RBP12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 CAPZA3Q96KX2 299 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 MRGPRX3Q96LB0 322 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 RUNDC3BQ96NL0 473 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 NELL2Q99435 816 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 LGMNQ99538 433 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 IL12RB2Q99665 862 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 FERMT1Q9BQL6 677 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 OSBPL6Q9BZF3 934 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 CEP44Q9C0F1 390 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 USP29Q9HBJ7 922 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 PCYOX1Q9UHG3 505 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 FEZ2Q9UHY8 353 aaPredicted RBP12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 DNPEPQ9ULA0 475 aa12.22□□□□□ -0.45
PDLIM5-220ENST00000514830 J3KR12 359 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 K7EQS6 105 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 CBX4O00257 560 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 ATP9BO43861 1147 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 HSPA9P38646 679 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 KIR2DL1P43626 348 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 SERPINH1P50454 418 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 RENBPP51606 427 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 PTPN5P54829 565 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 ZXDAP98168 799 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 KDSRQ06136 332 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 GRSF1Q12849 480 aaKnown RBP eCLIP12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 CCINQ13939 588 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 PTPRNQ16849 979 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 HSF5Q4G112 596 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 DGKKQ5KSL6 1271 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 IER5LQ5T953 404 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 NAIF1Q69YI7 327 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 HEATR6Q6AI08 1181 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 FSTL4Q6MZW2 842 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 ARHGAP36Q6ZRI8 547 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 TPRG1Q6ZUI0 275 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 ADAT2Q7Z6V5 191 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 PLPP6Q8IY26 295 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 SH2D3CQ8N5H7 860 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 CCNYQ8ND76 341 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 MNS1Q8NEH6 495 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 SPATA4Q8NEY3 305 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 ATL2Q8NHH9 583 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 HTR3CQ8WXA8 447 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 FAM3CQ92520 227 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 EZH1Q92800 747 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 MYO19Q96H55 970 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 SPON2Q9BUD6 331 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 SP110Q9HB58 689 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 FBRSL1Q9HCM7 1045 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 SMARCAL1Q9NZC9 954 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 THAP10Q9P2Z0 257 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 SLC25A13Q9UJS0 675 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 ERVW-1Q9UQF0 538 aa12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 MRPS17Q9Y2R5 130 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-220ENST00000514830 ANKRD36A6QL64 1941 aa12.21□□□□□ -0.46
PDLIM5-220ENST00000514830 KRBA1A5PL33 1030 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 TBC1D3BA6NDS4 549 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 C5orf60A6NFR6 353 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 H7C0C1 242 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 SNAP91O60641 907 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 MAP3K6O95382 1288 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 C7P10643 843 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 CCNB1P14635 433 aa12.2□□□□□ -0.46
PDLIM5-220ENST00000514830 VAV1P15498 845 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms