RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 GRIN3AQ8TCU5 1115 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 SAP25Q8TEE9 199 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 MYOCQ99972 504 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 C2orf49Q9BVC5 232 aaPredicted RBP13.64□□□□□ -0.23
PFDN1-206ENST00000514611 VPS16Q9H269 839 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 TNKS2Q9H2K2 1166 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 FAM207AQ9NSI2 230 aaPredicted RBP13.64□□□□□ -0.23
PFDN1-206ENST00000514611 LMBRD1Q9NUN5 540 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 ZNF212Q9UDV6 495 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 NOCTQ9UK39 431 aaKnown RBP13.64□□□□□ -0.23
PFDN1-206ENST00000514611 PAXBP1Q9Y5B6 917 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 TLR4O00206 839 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 KPNA3O00505 521 aaPredicted RBP13.63□□□□□ -0.23
PFDN1-206ENST00000514611 DFNA5O60443 496 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 ENDOD1O94919 500 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 GJB6O95452 261 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 F9P00740 461 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 OR1E1P30953 314 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 CLDN6P56747 220 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 ATP11AP98196 1134 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 FMO1Q01740 532 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 DNAJC3Q13217 504 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 KRT31Q15323 416 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 CDO1Q16878 200 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 C15orf59Q2T9L4 293 aaPredicted RBP13.63□□□□□ -0.23
PFDN1-206ENST00000514611 C6orf118Q5T5N4 469 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 CDKAL1Q5VV42 579 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 C22orf39Q6P5X5 142 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 LRRC31Q6UY01 552 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 SETD3Q86TU7 594 aaPredicted RBP13.63□□□□□ -0.23
PFDN1-206ENST00000514611 PRPF39Q86UA1 669 aaKnown RBP13.63□□□□□ -0.23
PFDN1-206ENST00000514611 TRIM69Q86WT6 500 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 MSANTD4Q8NCY6 345 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 ENOX1Q8TC92 643 aaKnown RBP13.63□□□□□ -0.23
PFDN1-206ENST00000514611 ARRDC3Q96B67 414 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 C1orf74Q96LT6 269 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 KDM4CQ9H3R0 1056 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 CCDC86Q9H6F5 360 aaKnown RBP13.63□□□□□ -0.23
PFDN1-206ENST00000514611 FZD3Q9NPG1 666 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 NLRC4Q9NPP4 1024 aa13.63□□□□□ -0.23
PFDN1-206ENST00000514611 TPX2Q9ULW0 747 aaKnown RBP13.63□□□□□ -0.23
PFDN1-206ENST00000514611 TP53BP1Q12888 1972 aaPredicted RBP13.63□□□□□ -0.23
PFDN1-206ENST00000514611 LOC400499M0QZD8 3231 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 ENC1O14682 589 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 CYP1A1P04798 512 aaPredicted RBP13.62□□□□□ -0.23
PFDN1-206ENST00000514611 PRLRP16471 622 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 CHRNB2P17787 502 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 CHRNA3P32297 505 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 JAM2P57087 298 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 POLR2FP61218 127 aaKnown RBP13.62□□□□□ -0.23
PFDN1-206ENST00000514611 ARF5P84085 180 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 BNIP3Q12983 259 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 SLC45A4Q5BKX6 768 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 EID2Q8N6I1 236 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 MFSD2AQ8NA29 543 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 SLC30A5Q8TAD4 765 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 GPT2Q8TD30 523 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 KLK6Q92876 244 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 CNDP2Q96KP4 475 aaKnown RBP13.62□□□□□ -0.23
PFDN1-206ENST00000514611 HAPLN3Q96S86 360 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 C11orf70Q9BRQ4 267 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 ZYG11BQ9C0D3 744 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 CAAP1Q9H8G2 361 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 PREBQ9HCU5 417 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 DMTF1Q9Y222 760 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 ACTL7AQ9Y615 435 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 PLXNB3Q9ULL4 1909 aa13.62□□□□□ -0.23
PFDN1-206ENST00000514611 A0A1W2PQU0 124 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 YKT6O15498 198 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 RNGTTO60942 597 aaKnown RBP13.61□□□□□ -0.23
PFDN1-206ENST00000514611 SDC3O75056 442 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 ZNF821O75541 412 aaPredicted RBP13.61□□□□□ -0.23
PFDN1-206ENST00000514611 ZMPSTE24O75844 475 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 MMP8P22894 467 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 SOX5P35711 763 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 ARRB1P49407 418 aaPredicted RBP13.61□□□□□ -0.23
PFDN1-206ENST00000514611 CLCN6P51797 869 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 CDR2Q01850 454 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 SMAD1Q15797 465 aaKnown RBP13.61□□□□□ -0.23
PFDN1-206ENST00000514611 SETMARQ53H47 684 aaPredicted RBP13.61□□□□□ -0.23
PFDN1-206ENST00000514611 ARSIQ5FYB1 569 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 CT47A1Q5JQC4 288 aaPredicted RBP13.61□□□□□ -0.23
PFDN1-206ENST00000514611 SFMBT2Q5VUG0 894 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 DPY19L3Q6ZPD9 716 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 KANSL1Q7Z3B3 1105 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 ZNF677Q86XU0 584 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 DRC7Q8IY82 874 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 GALNT15Q8N3T1 639 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 JOSD2Q8TAC2 188 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 RXFP2Q8WXD0 754 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 CCDC114Q96M63 670 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 SPON2Q9BUD6 331 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 ATP13A1Q9HD20 1204 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 NDFIP2Q9NV92 336 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 IL36AQ9UHA7 158 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 SIK3Q9Y2K2 1263 aa13.61□□□□□ -0.23
PFDN1-206ENST00000514611 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
PFDN1-206ENST00000514611 COL5A1P20908 1838 aaPredicted RBP13.6□□□□□ -0.23
PFDN1-206ENST00000514611 PTPRBP23467 1997 aa13.6□□□□□ -0.23
PFDN1-206ENST00000514611 ILVBLA1L0T0 632 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms