RNA–Protein interactions for RNA: ENST00000514528.5

MATR3-225, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-225ENST00000514528 SLC12A6Q9UHW9 1150 aa17.35■□□□□ 0.37
MATR3-225ENST00000514528 SLC25A13Q9UJS0 675 aa17.35■□□□□ 0.37
MATR3-225ENST00000514528 K7ESM1 405 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 FFAR2O15552 330 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 CLDN11O75508 207 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 MT-CO1P00395 513 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 HNRNPA2B1P22626 353 aaKnown RBP17.34■□□□□ 0.37
MATR3-225ENST00000514528 MTA1Q13330 715 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 PDCLQ13371 301 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 ISXQ2M1V0 245 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 ACCSLQ4AC99 568 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 TAF1BQ53T94 588 aaPredicted RBP17.34■□□□□ 0.37
MATR3-225ENST00000514528 ARTNQ5T4W7 220 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 BROXQ5VW32 411 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 TMC6Q7Z403 805 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 FAM174AQ8TBP5 190 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 KCNE4Q8WWG9 221 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 ZNF606Q8WXB4 792 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 PRR11Q96HE9 360 aaPredicted RBP17.34■□□□□ 0.37
MATR3-225ENST00000514528 NAF1Q96HR8 494 aaKnown RBP17.34■□□□□ 0.37
MATR3-225ENST00000514528 BMFQ96LC9 184 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 RPRD1AQ96P16 312 aaPredicted RBP17.34■□□□□ 0.37
MATR3-225ENST00000514528 HDAC8Q9BY41 377 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 GTPBP4Q9BZE4 634 aaKnown RBP17.34■□□□□ 0.37
MATR3-225ENST00000514528 FZD3Q9NPG1 666 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 VPS28Q9UK41 221 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 HS3ST4Q9Y661 456 aa17.34■□□□□ 0.37
MATR3-225ENST00000514528 PIEZO2Q9H5I5 2752 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 ALPPL2P10696 532 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 MYF5P13349 255 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 AKT2P31751 481 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 CHRNA3P32297 505 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 CDK17Q00537 523 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 VAC14Q08AM6 782 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 HS1BP3Q53T59 392 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 ARHGAP40Q5TG30 622 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 TTI2Q6NXR4 508 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 C14orf80Q86SX3 495 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 DCP2Q8IU60 420 aaKnown RBP17.33■□□□□ 0.36
MATR3-225ENST00000514528 TRIM59Q8IWR1 403 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 ZNF683Q8IZ20 524 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 DEFB106AQ8N104 65 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 WDTC1Q8N5D0 677 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 KLK6Q92876 244 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 GRAMD1AQ96CP6 724 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 CCDC34Q96HJ3 373 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 DHTKD1Q96HY7 919 aaPredicted RBP17.33■□□□□ 0.36
MATR3-225ENST00000514528 MYOCQ99972 504 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 DUSP23Q9BVJ7 150 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 THSD1Q9NS62 852 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 DDIT4Q9NX09 232 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 VANGL2Q9ULK5 521 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 HS3ST3A1Q9Y663 406 aa17.33■□□□□ 0.36
MATR3-225ENST00000514528 COL27A1Q8IZC6 1860 aaPredicted RBP17.33■□□□□ 0.36
MATR3-225ENST00000514528 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.32■□□□□ 0.36
MATR3-225ENST00000514528 B8ZZF3 427 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 I6L893 689 aaPredicted RBP17.32■□□□□ 0.36
MATR3-225ENST00000514528 RIOK3O14730 519 aaKnown RBP17.32■□□□□ 0.36
MATR3-225ENST00000514528 ZNF821O75541 412 aaPredicted RBP17.32■□□□□ 0.36
MATR3-225ENST00000514528 C6P13671 934 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 NME1P15531 152 aaKnown RBP17.32■□□□□ 0.36
MATR3-225ENST00000514528 CD44P16070 742 aaKnown RBP17.32■□□□□ 0.36
MATR3-225ENST00000514528 DUSP3P51452 185 aaPredicted RBP17.32■□□□□ 0.36
MATR3-225ENST00000514528 CDH4P55283 916 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 MARSP56192 900 aaKnown RBP17.32■□□□□ 0.36
MATR3-225ENST00000514528 CLDN2P57739 230 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 CETN1Q12798 172 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 ZNF177Q13360 481 aaPredicted RBP17.32■□□□□ 0.36
MATR3-225ENST00000514528 FGL2Q14314 439 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 FZD2Q14332 565 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 OTUD1Q5VV17 481 aaPredicted RBP17.32■□□□□ 0.36
MATR3-225ENST00000514528 SEL1L3Q68CR1 1132 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 KYAT3Q6YP21 454 aaKnown RBP17.32■□□□□ 0.36
MATR3-225ENST00000514528 VCPIP1Q96JH7 1222 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 SLC46A1Q96NT5 459 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 CALN1Q9BXU9 219 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 FAM204AQ9H8W3 233 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 ACP6Q9NPH0 428 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 VPS51Q9UID3 782 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 PCDHGA8Q9Y5G5 932 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 CSNK1G3Q9Y6M4 447 aa17.32■□□□□ 0.36
MATR3-225ENST00000514528 SPTY2D1-AS1A0A0U1RR47 76 aa17.31■□□□□ 0.36
MATR3-225ENST00000514528 NEMP2A6NFY4 417 aa17.31■□□□□ 0.36
MATR3-225ENST00000514528 A6NNZ2 444 aa17.31■□□□□ 0.36
MATR3-225ENST00000514528 CDRT15L2A8MXV6 281 aa17.31■□□□□ 0.36
MATR3-225ENST00000514528 K7ENP7 123 aa17.31■□□□□ 0.36
MATR3-225ENST00000514528 K7ERQ8 282 aa17.31■□□□□ 0.36
MATR3-225ENST00000514528 KLK10O43240 276 aa17.31■□□□□ 0.36
MATR3-225ENST00000514528 MED7O43513 233 aa17.31■□□□□ 0.36
MATR3-225ENST00000514528 SMAD6O43541 496 aaKnown RBP17.31■□□□□ 0.36
MATR3-225ENST00000514528 SNAP91O60641 907 aa17.31■□□□□ 0.36
MATR3-225ENST00000514528 HSF2BPO75031 334 aa17.31■□□□□ 0.36
MATR3-225ENST00000514528 CSF2P04141 144 aa17.31■□□□□ 0.36
MATR3-225ENST00000514528 ZNF18P17022 549 aa17.31■□□□□ 0.36
MATR3-225ENST00000514528 TGM2P21980 687 aa17.31■□□□□ 0.36
MATR3-225ENST00000514528 CLCN6P51797 869 aa17.31■□□□□ 0.36
MATR3-225ENST00000514528 HNRNPKP61978 463 aaKnown RBP eCLIP17.31■□□□□ 0.36
MATR3-225ENST00000514528 CCDC15Q0P6D6 951 aa17.31■□□□□ 0.36
MATR3-225ENST00000514528 ZCCHC8Q6NZY4 707 aaKnown RBP17.31■□□□□ 0.36
MATR3-225ENST00000514528 INO80CQ6PI98 192 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms