RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 BTN2A3PQ96KV6 586 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 CCNL2Q96S94 520 aaPredicted RBP14.3□□□□□ -0.12
SPCS3-204ENST00000513139 CALN1Q9BXU9 219 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 LMBRD1Q9NUN5 540 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 CSNK1G3Q9Y6M4 447 aa14.3□□□□□ -0.12
SPCS3-204ENST00000513139 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.29□□□□□ -0.12
SPCS3-204ENST00000513139 A0A1W2PQU0 124 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 SART1O43290 800 aaKnown RBP14.29□□□□□ -0.12
SPCS3-204ENST00000513139 MOCS2O96007 188 aaPredicted RBP14.29□□□□□ -0.12
SPCS3-204ENST00000513139 APOEP02649 317 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 MYF5P13349 255 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 PDGFRAP16234 1089 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 PRLRP16471 622 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 ZNF18P17022 549 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 TACR2P21452 398 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 TBXAS1P24557 533 aaPredicted RBP14.29□□□□□ -0.12
SPCS3-204ENST00000513139 UBE2HP62256 183 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 CLN3Q13286 438 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 ZNF177Q13360 481 aaPredicted RBP14.29□□□□□ -0.12
SPCS3-204ENST00000513139 STILQ15468 1287 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 EDRF1Q3B7T1 1238 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 ACCSLQ4AC99 568 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 ZCWPW2Q504Y3 356 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 PIP5KL1Q5T9C9 394 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 RAP1GAP2Q684P5 730 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 ATG14Q6ZNE5 492 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 RBM44Q6ZP01 1051 aaKnown RBP14.29□□□□□ -0.12
SPCS3-204ENST00000513139 CHSY1Q86X52 802 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 CCAR2Q8N163 923 aaKnown RBP14.29□□□□□ -0.12
SPCS3-204ENST00000513139 SLC22A18ASQ8N1D0 253 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 UBR7Q8N806 425 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 EXD3Q8N9H8 876 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 WDR36Q8NI36 951 aaKnown RBP14.29□□□□□ -0.12
SPCS3-204ENST00000513139 WDR48Q8TAF3 677 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 TFAP2BQ92481 460 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 TRIM62Q9BVG3 475 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 SRRTQ9BXP5 876 aaKnown RBP14.29□□□□□ -0.12
SPCS3-204ENST00000513139 GPR27Q9NS67 375 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 STARD5Q9NSY2 213 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 DNAJC28Q9NX36 388 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 XPO7Q9UIA9 1087 aaKnown RBP14.29□□□□□ -0.12
SPCS3-204ENST00000513139 SLC25A13Q9UJS0 675 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 ATXN7L1Q9ULK2 861 aaPredicted RBP14.29□□□□□ -0.12
SPCS3-204ENST00000513139 HS3ST3A1Q9Y663 406 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 UNC13CQ8NB66 2214 aa14.29□□□□□ -0.12
SPCS3-204ENST00000513139 EME2A4GXA9 379 aaPredicted RBP14.28□□□□□ -0.12
SPCS3-204ENST00000513139 TCAF2A6NFQ2 919 aa14.28□□□□□ -0.12
SPCS3-204ENST00000513139 A6NNZ2 444 aa14.28□□□□□ -0.12
SPCS3-204ENST00000513139 F5H5T6 163 aa14.28□□□□□ -0.12
SPCS3-204ENST00000513139 PIK3R2O00459 728 aa14.28□□□□□ -0.12
SPCS3-204ENST00000513139 ITGB2P05107 769 aa14.28□□□□□ -0.12
SPCS3-204ENST00000513139 ITGA2BP08514 1039 aa14.28□□□□□ -0.12
SPCS3-204ENST00000513139 NME1P15531 152 aaKnown RBP14.28□□□□□ -0.12
SPCS3-204ENST00000513139 INHBCP55103 352 aa14.28□□□□□ -0.12
SPCS3-204ENST00000513139 DLG2Q15700 870 aa14.28□□□□□ -0.12
SPCS3-204ENST00000513139 COLEC12Q5KU26 742 aa14.28□□□□□ -0.12
SPCS3-204ENST00000513139 CXorf57Q6NSI4 855 aaKnown RBP14.28□□□□□ -0.12
SPCS3-204ENST00000513139 KRBA2Q6ZNG9 492 aa14.28□□□□□ -0.12
SPCS3-204ENST00000513139 GCNT7Q6ZNI0 430 aa14.28□□□□□ -0.12
SPCS3-204ENST00000513139 ALG14Q96F25 216 aa14.28□□□□□ -0.12
SPCS3-204ENST00000513139 MYOCQ99972 504 aa14.28□□□□□ -0.12
SPCS3-204ENST00000513139 SALL4Q9UJQ4 1053 aa14.28□□□□□ -0.12
SPCS3-204ENST00000513139 NAALADL1Q9UQQ1 740 aa14.28□□□□□ -0.12
SPCS3-204ENST00000513139 KCNU1A8MYU2 1149 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 H3BM21 787 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 TPP1O14773 563 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 NEBLO76041 1014 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 TNFSF15O95150 251 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 CSF2P04141 144 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 EPB41P11171 864 aaKnown RBP14.27□□□□□ -0.13
SPCS3-204ENST00000513139 SFTPCP11686 197 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 KRT10P13645 584 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 RPL34P49207 117 aaKnown RBP14.27□□□□□ -0.13
SPCS3-204ENST00000513139 CDKN3Q16667 212 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 ZSCAN23Q3MJ62 389 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 CBWD6Q4V339 395 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 ZC3H12AQ5D1E8 599 aaKnown RBP14.27□□□□□ -0.13
SPCS3-204ENST00000513139 CBWD3Q5JTY5 395 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 RABGAP1LQ5R372 815 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 CBWD5Q5RIA9 395 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 GUSBP11Q6P575 273 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 ZNF574Q6ZN55 896 aaPredicted RBP14.27□□□□□ -0.13
SPCS3-204ENST00000513139 Q6ZSR6 202 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 Q6ZVU0 165 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 EFL1Q7Z2Z2 1120 aaKnown RBP14.27□□□□□ -0.13
SPCS3-204ENST00000513139 TAC4Q86UU9 113 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 SH2D3CQ8N5H7 860 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 ZNF548Q8NEK5 533 aaPredicted RBP14.27□□□□□ -0.13
SPCS3-204ENST00000513139 TMIEQ8NEW7 156 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 KLK6Q92876 244 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 RNF34Q969K3 372 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 NOX5Q96PH1 765 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 PRMT1Q99873 361 aaKnown RBP14.27□□□□□ -0.13
SPCS3-204ENST00000513139 SEMA3CQ99985 751 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 FEM1AQ9BSK4 669 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 MIS12Q9H081 205 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 FZD3Q9NPG1 666 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.27□□□□□ -0.13
SPCS3-204ENST00000513139 SLC12A6Q9UHW9 1150 aa14.27□□□□□ -0.13
SPCS3-204ENST00000513139 MAPK8IP1Q9UQF2 711 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms