RNA–Protein interactions for RNA: ENST00000512517.1

LINC01258-201, Transcript of long intergenic non-protein coding RNA 1258, humanhuman

TSL 2 BASIC

Gene LINC01258, Length 2,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01258-201ENST00000512517 SCUBE2Q9NQ36 999 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 PARVAQ9NVD7 372 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 ARMCX1Q9P291 453 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 TXNDC16Q9P2K2 825 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 C1orf232A0A0U1RR37 186 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 EXOC1LA0A1B0GW35 172 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 ARHGEF37A1IGU5 675 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 TRIM64A6NGJ6 449 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 DEAF1O75398 565 aaPredicted RBP9.04□□□□□ -0.96
LINC01258-201ENST00000512517 EPN2O95208 641 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 OR5F1O95221 314 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 CCNA2P20248 432 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 MAPK4P31152 587 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 ICAM3P32942 547 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 ERFP50548 548 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 TMBIM6P55061 237 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 GNA12Q03113 381 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 KDSRQ06136 332 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 SREBF2Q12772 1141 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 OVGP1Q12889 678 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 TARDBPQ13148 414 aaKnown RBP eCLIP9.04□□□□□ -0.96
LINC01258-201ENST00000512517 GK3PQ14409 553 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 ARHGAP44Q17R89 818 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 PLA2G4EQ3MJ16 856 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 ATG16L1Q676U5 607 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 CYP4F22Q6NT55 531 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 UNC5AQ6ZN44 842 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 C1orf186Q6ZWK4 172 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 PRPF39Q86UA1 669 aaKnown RBP9.04□□□□□ -0.96
LINC01258-201ENST00000512517 CCDC60Q8IWA6 550 aaPredicted RBP9.04□□□□□ -0.96
LINC01258-201ENST00000512517 FBXL6Q8N531 539 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 ERLEC1Q96DZ1 483 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 SAMD11Q96NU1 681 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 ZIC5Q96T25 663 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 KCNK16Q96T55 309 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 TSG101Q99816 390 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 CCDC106Q9BWC9 280 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 EMILIN2Q9BXX0 1053 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 DPEP3Q9H4B8 488 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 PPARGC1AQ9UBK2 798 aaKnown RBP9.04□□□□□ -0.96
LINC01258-201ENST00000512517 SEPT9Q9UHD8 586 aaPredicted RBP9.04□□□□□ -0.96
LINC01258-201ENST00000512517 SLC24A2Q9UI40 661 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 ITGA11Q9UKX5 1188 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 CDC14AQ9UNH5 594 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 POMPQ9Y244 141 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 CAB39Q9Y376 341 aaPredicted RBP9.04□□□□□ -0.96
LINC01258-201ENST00000512517 RNF11Q9Y3C5 154 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 COL4A3BPQ9Y5P4 624 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 BRCA2P51587 3418 aa9.04□□□□□ -0.96
LINC01258-201ENST00000512517 EVPLQ92817 2033 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 A8MX80 341 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 FAM155AB1AL88 458 aaPredicted RBP9.03□□□□□ -0.96
LINC01258-201ENST00000512517 ANKRD63C9JTQ0 380 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 NOP56O00567 594 aaKnown RBP9.03□□□□□ -0.96
LINC01258-201ENST00000512517 KLF11O14901 512 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 FAM189A1O60320 539 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 ARIH2O95376 493 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 TMEM253P0C7T8 217 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 TXNP10599 105 aaKnown RBP9.03□□□□□ -0.96
LINC01258-201ENST00000512517 FGFR1P11362 822 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 GFAPP14136 432 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 GABRB3P28472 473 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 OR3A3P47888 321 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 RARRES1P49788 294 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 TMPRSS15P98073 1019 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 IRF5Q13568 498 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 GALNT3Q14435 633 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 PDK1Q15118 436 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 PRKD1Q15139 912 aaPredicted RBP9.03□□□□□ -0.96
LINC01258-201ENST00000512517 DLG2Q15700 870 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 FGD3Q5JSP0 725 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 ZNF571Q7Z3V5 609 aaPredicted RBP9.03□□□□□ -0.96
LINC01258-201ENST00000512517 ARMC8Q8IUR7 673 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 GPIHBP1Q8IV16 184 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 TRIM59Q8IWR1 403 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 C4orf19Q8IY42 314 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 RDM1Q8NG50 284 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 FRS2Q8WU20 508 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 SECISBP2Q96T21 854 aaKnown RBP9.03□□□□□ -0.96
LINC01258-201ENST00000512517 CLSTN3Q9BQT9 956 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 TRIM56Q9BRZ2 755 aaKnown RBP9.03□□□□□ -0.96
LINC01258-201ENST00000512517 TMEM79Q9BSE2 394 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 ANLNQ9NQW6 1124 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 PDGFCQ9NRA1 345 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 CDH22Q9UJ99 828 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 RIMS3Q9UJD0 308 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 H3BUI4 141 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 GCNT3O95395 438 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 SERPINA6P08185 405 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 SUPT20HL2P0C7V6 817 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 MAP4P27816 1152 aaKnown RBP9.03□□□□□ -0.96
LINC01258-201ENST00000512517 TRIM23P36406 574 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 CDKL1Q00532 357 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 CTBSQ01459 385 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 RUNX1T1Q06455 604 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 CRHR2Q13324 411 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 PTK6Q13882 451 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 GRB14Q14449 540 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 ACAP2Q15057 778 aa9.03□□□□□ -0.96
LINC01258-201ENST00000512517 PTPROQ16827 1216 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms