RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 GOT1P17174 413 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 MAOBP27338 520 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 PCK1P35558 622 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 VASPP50552 380 aaPredicted RBP14.28□□□□□ -0.12
DDX41-212ENST00000511040 DNA2P51530 1060 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 ZBTB16Q05516 673 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 PIGHQ14442 188 aaPredicted RBP14.28□□□□□ -0.12
DDX41-212ENST00000511040 RETSATQ6NUM9 610 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 C22orf39Q6P5X5 142 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 AADATQ8N5Z0 425 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 GPR161Q8N6U8 529 aaKnown RBP14.28□□□□□ -0.12
DDX41-212ENST00000511040 C12orf50Q8NA57 414 aaPredicted RBP14.28□□□□□ -0.12
DDX41-212ENST00000511040 NETO2Q8NC67 525 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 CHST14Q8NCH0 376 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 OR8D1Q8WZ84 308 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 HMCESQ96FZ2 354 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 MRFAP1L1Q96HT8 127 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 CFAP54Q96N23 3096 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 KLC2Q9H0B6 622 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 C6orf106Q9H6K1 298 aaPredicted RBP14.28□□□□□ -0.12
DDX41-212ENST00000511040 FSCN3Q9NQT6 498 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 RXFP3Q9NSD7 469 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 SARDHQ9UL12 918 aa14.28□□□□□ -0.12
DDX41-212ENST00000511040 TNRC6BQ9UPQ9 1833 aaKnown RBP14.28□□□□□ -0.12
DDX41-212ENST00000511040 FCF1Q9Y324 198 aaKnown RBP14.28□□□□□ -0.12
DDX41-212ENST00000511040 GON4LQ3T8J9 2241 aa14.27□□□□□ -0.12
DDX41-212ENST00000511040 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.27□□□□□ -0.13
DDX41-212ENST00000511040 FAM47DPA6NHR8 397 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 RASA4BC9J798 803 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 FGF10O15520 208 aaPredicted RBP14.27□□□□□ -0.13
DDX41-212ENST00000511040 DAPK3O43293 454 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 RASA4O43374 803 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 RNASEH2AO75792 299 aaKnown RBP14.27□□□□□ -0.13
DDX41-212ENST00000511040 GJC1P36383 396 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 ETFBP38117 255 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 SERPINH1P50454 418 aaKnown RBP14.27□□□□□ -0.13
DDX41-212ENST00000511040 LMNB2Q03252 620 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 ACAP1Q15027 740 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 AASDHQ4L235 1098 aaPredicted RBP14.27□□□□□ -0.13
DDX41-212ENST00000511040 SPDYCQ5MJ68 293 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 RFX8Q6ZV50 586 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 SYT12Q8IV01 421 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 RGL4Q8IZJ4 473 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 HDDC3Q8N4P3 179 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 NIPA2Q8N8Q9 360 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 OR2A12Q8NGT7 310 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 SNX19Q92543 992 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 ZNF419Q96HQ0 510 aaPredicted RBP14.27□□□□□ -0.13
DDX41-212ENST00000511040 CELF6Q96J87 481 aaKnown RBP14.27□□□□□ -0.13
DDX41-212ENST00000511040 OMDQ99983 421 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 MAGEH1Q9H213 219 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 NEUROG2Q9H2A3 272 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 RETREG1Q9H6L5 497 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 OSGEPQ9NPF4 335 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.27□□□□□ -0.13
DDX41-212ENST00000511040 PILRBQ9UKJ0 227 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 HPCAL4Q9UM19 191 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 NCKAP1Q9Y2A7 1128 aa14.27□□□□□ -0.13
DDX41-212ENST00000511040 WASH4PA8MWX3 477 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 RNF103O00237 685 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 KHNYNO15037 678 aaKnown RBP14.26□□□□□ -0.13
DDX41-212ENST00000511040 BUB1O43683 1085 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 KDELR3O43731 214 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 ZNF821O75541 412 aaPredicted RBP14.26□□□□□ -0.13
DDX41-212ENST00000511040 SEMA4FO95754 770 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 CD160O95971 181 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 ADH1BP00325 375 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 CFIP05156 583 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 CTSLP07711 333 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 TMEM253P0C7T8 217 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 RARAP10276 462 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 C7P10643 843 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 C5AR1P21730 350 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 CLCN6P51797 869 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 SLC25A11Q02978 314 aaKnown RBP14.26□□□□□ -0.13
DDX41-212ENST00000511040 RSPO4Q2I0M5 234 aaPredicted RBP14.26□□□□□ -0.13
DDX41-212ENST00000511040 DCAF12L1Q5VU92 463 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.26□□□□□ -0.13
DDX41-212ENST00000511040 DSG4Q86SJ6 1040 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 PSTKQ8IV42 348 aaKnown RBP14.26□□□□□ -0.13
DDX41-212ENST00000511040 PIP4K2CQ8TBX8 421 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 GRIN3AQ8TCU5 1115 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 NCAPGQ9BPX3 1015 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 TM6SF2Q9BZW4 377 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 BTBD1Q9H0C5 482 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 MIR1-1HGQ9H1L0 117 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 CWC15Q9P013 229 aaKnown RBP14.26□□□□□ -0.13
DDX41-212ENST00000511040 UVRAGQ9P2Y5 699 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 PPM1HQ9ULR3 514 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 MFHAS1Q9Y4C4 1052 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 ZNF292O60281 2723 aa14.26□□□□□ -0.13
DDX41-212ENST00000511040 METTL12A8MUP2 240 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 EIF3CLB5ME19 914 aaKnown RBP14.25□□□□□ -0.13
DDX41-212ENST00000511040 H3BRJ5 948 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 MCF2LO15068 1137 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 PROSCO94903 275 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 FSBPO95073 299 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 ERCC2P18074 760 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 AMPD1P23109 780 aa14.25□□□□□ -0.13
DDX41-212ENST00000511040 CHRNA3P32297 505 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms