RNA–Protein interactions for RNA: ENST00000509620.6

OTUD4-208, Transcript of OTU deubiquitinase 4, human

TSL 1 (best) BASIC

Gene OTUD4, Length 864 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
OTUD4-208	ENST00000509620	NME8	Q8N427	588 aa		4.55	□□□□□ -1.68
OTUD4-208	ENST00000509620	NANOGP1	Q8N7R0	232 aa		4.55	□□□□□ -1.68
OTUD4-208	ENST00000509620	C16orf52	Q8NHV5	167 aa		4.55	□□□□□ -1.68
OTUD4-208	ENST00000509620	RFFL	Q8WZ73	363 aa		4.55	□□□□□ -1.68
OTUD4-208	ENST00000509620	RPL36AL	Q969Q0	106 aa	Known RBP	4.55	□□□□□ -1.68
OTUD4-208	ENST00000509620	MSI2	Q96DH6	328 aa	Known RBP	4.55	□□□□□ -1.68
OTUD4-208	ENST00000509620	RRP36	Q96EU6	259 aa	Known RBP	4.55	□□□□□ -1.68
OTUD4-208	ENST00000509620	C7orf26	Q96N11	449 aa		4.55	□□□□□ -1.68
OTUD4-208	ENST00000509620	CTDSP1	Q9GZU7	261 aa		4.55	□□□□□ -1.68
OTUD4-208	ENST00000509620	MSRB1	Q9NZV6	116 aa		4.55	□□□□□ -1.68
OTUD4-208	ENST00000509620	RNF7	Q9UBF6	113 aa		4.55	□□□□□ -1.68
OTUD4-208	ENST00000509620	HEY2	Q9UBP5	337 aa		4.55	□□□□□ -1.68
OTUD4-208	ENST00000509620	ZMYM2	Q9UBW7	1377 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620		A0A0A0MQY5	61 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	KIR2DS5	A0A0G2JLQ3	304 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620		A6NNC1	897 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	ZNF814	B7Z6K7	855 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	KIR2DS3	K7RE56	304 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	DHX16	O60231	1041 aa	Known RBP	4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	TMEM63A	O94886	807 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	DDX58	O95786	925 aa	Known RBP	4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	ATP1A3	P13637	1013 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	CD72	P21854	359 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	GSTM2	P28161	218 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	STAT1	P42224	750 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	GPD2	P43304	727 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	FOXD4	Q12950	439 aa	Predicted RBP	4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	GALNT3	Q14435	633 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	SH2D4B	Q5SQS7	431 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	VWA5B1	Q5TIE3	1220 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	TTLL5	Q6EMB2	1281 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	ACAD10	Q6JQN1	1059 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	MZT2B	Q6NZ67	158 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	C4orf50	Q6ZRC1	276 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	CYB5R4	Q7L1T6	521 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	CCDC25	Q86WR0	208 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	KLB	Q86Z14	1044 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	BRSK2	Q8IWQ3	736 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	NRAC	Q8N912	160 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	DENND1A	Q8TEH3	1009 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	STAM	Q92783	540 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	ZUFSP	Q96AP4	578 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	SH3KBP1	Q96B97	665 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	ZBTB10	Q96DT7	871 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	RNFT2	Q96EX2	444 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	PAIP1	Q9H074	479 aa	Known RBP	4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	TMX4	Q9H1E5	349 aa	Predicted RBP	4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	STN1	Q9H668	368 aa	Known RBP	4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	SPAG4	Q9NPE6	437 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	THSD1	Q9NS62	852 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	OLA1	Q9NTK5	396 aa	Known RBP	4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	TUBA8	Q9NY65	449 aa	Predicted RBP	4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	HDAC6	Q9UBN7	1215 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	UPB1	Q9UBR1	384 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	COG5	Q9UP83	839 aa		4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	LAS1L	Q9Y4W2	734 aa	Known RBP	4.54	□□□□□ -1.68
OTUD4-208	ENST00000509620	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620		A0A087X0M5	115 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620		A0A1B0GX30	115 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	DPPA5	A6NC42	116 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	FOXO6	A8MYZ6	492 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	PEX12	O00623	359 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	HSP90AA1	P07900	732 aa	Known RBP	4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	KLRC2	P26717	231 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	ARHGAP8	P85298	464 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	AP5B1	Q2VPB7	878 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	ENTPD8	Q5MY95	495 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	HMBOX1	Q6NT76	420 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	C11orf87	Q6NUJ2	197 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	AADACL2	Q6P093	401 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	C1QL2	Q7Z5L3	287 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	ARMC8	Q8IUR7	673 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	NOC3L	Q8WTT2	800 aa	Known RBP	4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	NCSTN	Q92542	709 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	RNF125	Q96EQ8	232 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	ZFYVE19	Q96K21	471 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	TUBB6	Q9BUF5	446 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	C1QTNF7	Q9BXJ2	289 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	TAOK3	Q9H2K8	898 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	ELOVL5	Q9NYP7	299 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	CNOT7	Q9UIV1	285 aa	Known RBP	4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	AGO2	Q9UKV8	859 aa	Known RBP	4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	HSF4	Q9ULV5	492 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	CYP46A1	Q9Y6A2	500 aa		4.53	□□□□□ -1.68
OTUD4-208	ENST00000509620	TMEM247	A6NEH6	219 aa		4.52	□□□□□ -1.69
OTUD4-208	ENST00000509620	TLX3	O43711	291 aa	Predicted RBP	4.52	□□□□□ -1.69
OTUD4-208	ENST00000509620	ATG13	O75143	517 aa		4.52	□□□□□ -1.69
OTUD4-208	ENST00000509620	RTN3	O95197	1032 aa	Predicted RBP	4.52	□□□□□ -1.69
OTUD4-208	ENST00000509620	HLA-DQA2	P01906	255 aa		4.52	□□□□□ -1.69
OTUD4-208	ENST00000509620	FGB	P02675	491 aa		4.52	□□□□□ -1.69
OTUD4-208	ENST00000509620	WEE2	P0C1S8	567 aa		4.52	□□□□□ -1.69
OTUD4-208	ENST00000509620	CHRNB1	P11230	501 aa		4.52	□□□□□ -1.69
OTUD4-208	ENST00000509620	FCGR2A	P12318	317 aa		4.52	□□□□□ -1.69
OTUD4-208	ENST00000509620	GJC1	P36383	396 aa		4.52	□□□□□ -1.69
OTUD4-208	ENST00000509620	ARL1	P40616	181 aa	Predicted RBP	4.52	□□□□□ -1.69
OTUD4-208	ENST00000509620	PTPN9	P43378	593 aa		4.52	□□□□□ -1.69
OTUD4-208	ENST00000509620	NAP1L1	P55209	391 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms