RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 FAM182AQ5T1J6 154 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 DCAF12L1Q5VU92 463 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 DCUN1D2Q6PH85 259 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 MMAAQ8IVH4 418 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 SLC41A1Q8IVJ1 513 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 HDDC3Q8N4P3 179 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 CADM4Q8NFZ8 388 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 NTAN1Q96AB6 310 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 VOPP1Q96AW1 172 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 MYO19Q96H55 970 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 ZNF419Q96HQ0 510 aaPredicted RBP8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 OMDQ99983 421 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 KLC2Q9H0B6 622 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 BTBD1Q9H0C5 482 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 DEF6Q9H4E7 631 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 FSCN3Q9NQT6 498 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 KLHL11Q9NVR0 708 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 SLCO3A1Q9UIG8 710 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 OR51B4Q9Y5P0 310 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 ACTL7AQ9Y615 435 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 ADGRG1Q9Y653 693 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 SCINQ9Y6U3 715 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 SPAG17Q6Q759 2223 aa8.97□□□□□ -0.97
PDLIM5-213ENST00000509357 SHROOM3Q8TF72 1996 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 TARSL2A2RTX5 802 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 C3orf70A6NLC5 250 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 DRGXA6NNA5 263 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 TMEM110-MUSTN1A8MSY1 372 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 RNF103O00237 685 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 BUB1O43683 1085 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 BNIP3LO60238 219 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 BUB1BO60566 1050 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 RNASEH2AO75792 299 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 PROSCO94903 275 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 FSBPO95073 299 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 RARAP10276 462 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 DESP17661 470 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 PSMD8P48556 350 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 STK19P49842 368 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 VAV2P52735 878 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 HADHBP55084 474 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 CDH4P55283 916 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 KRT83P78385 493 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 MMRN1Q13201 1228 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 ARL13BQ3SXY8 428 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 ACBD5Q5T8D3 534 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 SLC23A3Q6PIS1 610 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 TFAP2DQ7Z6R9 452 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 VPS36Q86VN1 386 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 LRRC57Q8N9N7 239 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 KDM1BQ8NB78 822 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 RFFLQ8WZ73 363 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 TSC1Q92574 1164 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 TRIM11Q96F44 468 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 MRGPRX3Q96LB0 322 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 HAPLN3Q96S86 360 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 PSMB7Q99436 277 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 HERPUD2Q9BSE4 406 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 OSBPL2Q9H1P3 480 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 RSPH9Q9H1X1 276 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 ETNK2Q9NVF9 386 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 FBXL12Q9NXK8 326 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 CTTNBP2NLQ9P2B4 639 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 EIF2B4Q9UI10 523 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 INTUQ9ULD6 942 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 CAPN6Q9Y6Q1 641 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 RALGAPA1Q6GYQ0 2036 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 GON4LQ3T8J9 2241 aa8.96□□□□□ -0.98
PDLIM5-213ENST00000509357 THADAQ6YHU6 1953 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 A0A0D9SEW6 157 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 A0A1B0GTW7 788 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 GRID2IPA4D2P6 1211 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 METTL12A8MUP2 240 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 ARHGAP33O14559 1287 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 BCAT2O15382 392 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 OPHN1O60890 802 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 SEMA4FO95754 770 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 CD160O95971 181 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 IL1BP01584 269 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 IGLV3-19P01714 112 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 GOT1P17174 413 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 GLDCP23378 1020 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 OR1E1P30953 314 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 L1CAMP32004 1257 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 SLC8A1P32418 973 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 ACSL1P33121 698 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 PCK1P35558 622 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 CYLC1P35663 651 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 NOVA1P51513 510 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 GSDMDP57764 484 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 NRG1Q02297 640 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 MESDQ14696 234 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 CST6Q15828 149 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 C6orf118Q5T5N4 469 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 C9orf64Q5T6V5 341 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 PSAPL1Q6NUJ1 521 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 RWDD4Q6NW29 188 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 PPP1R2P3Q6NXS1 205 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 SCYL2Q6P3W7 929 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 SLFN11Q7Z7L1 901 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms