RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 RGS9O75916 674 aaPredicted RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 FHP07954 510 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 STAG3L1P0CL83 205 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 RPA2P15927 270 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 NPR1P16066 1061 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 MAOBP27338 520 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 CEBPGP53567 150 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 NOP14P78316 857 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 DR1Q01658 176 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 AUHQ13825 339 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 DDX39BQ13838 428 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 PCSK7Q16549 785 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF280BQ86YH2 543 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 C10orf67Q8IYJ2 551 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 SUPT20HQ8NEM7 779 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 FBXL18Q96ME1 805 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 INSM2Q96T92 566 aaPredicted RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 TIMM29Q9BSF4 260 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ERVK-5Q9HDB9 667 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 PIH1D3Q9NQM4 214 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 CACNA2D2Q9NY47 1150 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 TNFRSF10DQ9UBN6 386 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 FEM1BQ9UK73 627 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 VAV3Q9UKW4 847 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ATAD5Q96QE3 1844 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 PLIN4Q96Q06 1357 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 EDDM13A0A1B0GTR0 161 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 GREM1O60565 184 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 CALCAP01258 141 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 GSTP1P09211 210 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 UGT1A1P22309 533 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 CD151P48509 253 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 SCNN1DP51172 638 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 NR0B1P51843 470 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 PSMD4P55036 377 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 RPS8P62241 208 aaKnown RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 ASIC1P78348 528 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 C5orf22Q49AR2 442 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 GLRA4Q5JXX5 417 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ATF7IP2Q5U623 682 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 RAP1GAP2Q684P5 730 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 OTUD7BQ6GQQ9 843 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 MTFR2Q6P444 385 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 MOXD1Q6UVY6 613 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 HAUS6Q7Z4H7 955 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 LUZP2Q86TE4 346 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 TSPYL5Q86VY4 417 aaPredicted RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 FOXRED2Q8IWF2 684 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 MCEMP1Q8IX19 187 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 FAM71BQ8TC56 605 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 STON2Q8WXE9 905 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 IFT81Q8WYA0 676 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 ADIPOR1Q96A54 375 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 SGF29Q96ES7 293 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 HHIPQ96QV1 700 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 CCDC77Q9BR77 488 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 BRF2Q9HAW0 419 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 GLOD4Q9HC38 313 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 MAGEE1Q9HCI5 957 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 PDLIM7Q9NR12 457 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 CFAP97Q9P2B7 532 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 USP22Q9UPT9 525 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 PCDHGA6Q9Y5G7 932 aa4□□□□□ -1.77
NEDD4-209ENST00000508871 GPC6Q9Y625 555 aaPredicted RBP4□□□□□ -1.77
NEDD4-209ENST00000508871 NFIBO00712 420 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 AREL1O15033 823 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 GPAA1O43292 621 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ACSL4O60488 711 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 F12P00748 615 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 CALM1P0DP23 149 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 CALM2P0DP24 149 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 CALM3P0DP25 149 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 IRF1P10914 325 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 GALP22466 123 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 JAK1P23458 1154 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 DGKAP23743 735 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 DNAJB1P25685 340 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ETV3P41162 512 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 BCL6P41182 706 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 PITPNBP48739 271 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 BEX3Q00994 111 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ORC2Q13416 577 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 TP53BP2Q13625 1128 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 LPIN1Q14693 890 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 EPHA7Q15375 998 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 PRAMEF18Q5VWM3 479 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 PDPK2PQ6A1A2 396 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 TUBA3EQ6PEY2 450 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 CAND1Q86VP6 1230 aaKnown RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 LRRC49Q8IUZ0 686 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ANKRD53Q8N9V6 530 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 DNAAF3Q8N9W5 541 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 OR6Y1Q8NGX8 325 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF507Q8TCN5 953 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF483Q8TF39 744 aaPredicted RBP3.99□□□□□ -1.77
NEDD4-209ENST00000508871 RTKNQ9BST9 563 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 MRIQ9BWK5 157 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 PKIBQ9C010 78 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 RASSF4Q9H2L5 321 aa3.99□□□□□ -1.77
NEDD4-209ENST00000508871 MLXIPQ9HAP2 919 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms