RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 RNF219Q5W0B1 726 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 BBS12Q6ZW61 710 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 EEPD1Q7L9B9 569 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 FAM71AQ8IYT1 594 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 SAMD3Q8N6K7 520 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 PHF21BQ96EK2 531 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 CENPNQ96H22 339 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 CLPTM1LQ96KA5 538 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 CAMKK2Q96RR4 588 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 RHOBTB2Q9BYZ6 727 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 HIPK3Q9H422 1215 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 DBNDD1Q9H9R9 158 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 CISHQ9NSE2 258 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 LMCD1Q9NZU5 365 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 MORF4L1Q9UBU8 362 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 PTBP2Q9UKA9 531 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 PRR12Q9ULL5 1215 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 PCDHGA3Q9Y5H0 932 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 COL15A1P39059 1388 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 ARAP3Q8WWN8 1544 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 TCRBV9S1A1TA0A576 114 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 M0QYT0 321 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 CST1P01037 141 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 COL3A1P02461 1466 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 ITIH1P19827 911 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 AMPD1P23109 780 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 CCNG1P51959 295 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 NAGLUP54802 743 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 ARPP19P56211 112 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 TTLL4Q14679 1199 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 C15orf59Q2T9L4 293 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 SUPT20HL1Q3ZLR7 823 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 HGSNATQ68CP4 663 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 PMF1Q6P1K2 205 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 SH3BP5LQ7L8J4 393 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 P2RY8Q86VZ1 359 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 TMEM126BQ8IUX1 230 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 LRRC57Q8N9N7 239 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 NXNL1Q96CM4 212 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 EBNA1BP2Q99848 306 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 FICDQ9BVA6 458 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 ANKHQ9HCJ1 492 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 KCNH7Q9NS40 1196 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 TAS2R14Q9NYV8 317 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 SPASTQ9UBP0 616 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 NKX1-2Q9UD57 310 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 PADI4Q9UM07 663 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 RGS14O43566 566 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 ENO2P09104 434 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 SLC2A3P11169 496 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 NELFEP18615 380 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 TIE1P35590 1138 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 GSTM5P46439 218 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 NPTX2P47972 431 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 PDIA6Q15084 440 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 USP39Q53GS9 565 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 RASSF6Q6ZTQ3 369 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 KCTD8Q6ZWB6 473 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 FBXO33Q7Z6M2 555 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 LRRC71Q8N4P6 559 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 AFG1LQ8WV93 481 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 YME1L1Q96TA2 773 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 CIB1Q99828 191 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 MRPL57Q9BQC6 102 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 TARS2Q9BW92 718 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 FAM49AQ9H0Q0 323 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 SMARCAD1Q9H4L7 1026 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 GPATCH2LQ9NWQ4 482 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 MAP3K20Q9NYL2 800 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 ERAP1Q9NZ08 941 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 POMPQ9Y244 141 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 SNX8Q9Y5X2 465 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 G3V2T6 193 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 SLC22A1O15245 554 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 RGS10O43665 173 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 NRP2O60462 931 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 TIPRLO75663 272 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 FBXO21O94952 628 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 CPSF4O95639 269 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 MT-CO1P00395 513 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 LTA4HP09960 611 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 MSL3P1P0C860 447 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 ATF6P18850 670 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 HNF4AP41235 474 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 RPS9P46781 194 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 SRP54P61011 504 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 PTPN11Q06124 597 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 IL18R1Q13478 541 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 MAMLD1Q13495 774 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 FSCN1Q16658 493 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 PPM1LQ5SGD2 360 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 TWF2Q6IBS0 349 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 ARHGAP36Q6ZRI8 547 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 NECAB2Q7Z6G3 386 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 IRF2BP1Q8IU81 584 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 CAMKK1Q8N5S9 505 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 EFCAB3Q8N7B9 438 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 FBXO30Q8TB52 745 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 ALG3Q92685 438 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 GPRASP2Q96D09 838 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms