RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 TSGA10Q9BZW7 698 aa15.32■□□□□ 0.04
RNF4-210ENST00000508235 MKRN2Q9H000 416 aaKnown RBP15.32■□□□□ 0.04
RNF4-210ENST00000508235 RSPH9Q9H1X1 276 aaPredicted RBP15.32■□□□□ 0.04
RNF4-210ENST00000508235 NOL6Q9H6R4 1146 aaKnown RBP15.32■□□□□ 0.04
RNF4-210ENST00000508235 LRRC19Q9H756 370 aa15.32■□□□□ 0.04
RNF4-210ENST00000508235 TFR2Q9UP52 801 aa15.32■□□□□ 0.04
RNF4-210ENST00000508235 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.32■□□□□ 0.04
RNF4-210ENST00000508235 ALG6Q9Y672 507 aa15.32■□□□□ 0.04
RNF4-210ENST00000508235 DCLK1O15075 740 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 PSTPIP1O43586 416 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 BUB1O43683 1085 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 RHOBTB1O94844 696 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 LMNAP02545 664 aaKnown RBP15.31■□□□□ 0.04
RNF4-210ENST00000508235 DNTTP04053 509 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 OXTRP30559 389 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 ARSEP51690 589 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 DPYSL3Q14195 570 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 ELF2Q15723 593 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 AFMIDQ63HM1 303 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 C22orf39Q6P5X5 142 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 PRR23BQ6ZRT6 265 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 PCDH20Q8N6Y1 951 aaKnown RBP15.31■□□□□ 0.04
RNF4-210ENST00000508235 TPCN2Q8NHX9 752 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 ISG20Q96AZ6 181 aaKnown RBP15.31■□□□□ 0.04
RNF4-210ENST00000508235 HMCESQ96FZ2 354 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 DESI2Q9BSY9 194 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 ITM2CQ9NQX7 267 aa15.31■□□□□ 0.04
RNF4-210ENST00000508235 USP36Q9P275 1121 aaKnown RBP15.31■□□□□ 0.04
RNF4-210ENST00000508235 LRRD1A4D1F6 860 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 RCCD1A6NED2 376 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 MCF2LO15068 1137 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 MAP3K13O43283 966 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 MT-CO1P00395 513 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 AMPD1P23109 780 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 KDELR1P24390 212 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 PLA2G5P39877 138 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 PAPOLAP51003 745 aaKnown RBP15.3■□□□□ 0.04
RNF4-210ENST00000508235 RPS14P62263 151 aaKnown RBP15.3■□□□□ 0.04
RNF4-210ENST00000508235 SRSF5Q13243 272 aaKnown RBP15.3■□□□□ 0.04
RNF4-210ENST00000508235 MAP7D1Q3KQU3 841 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 ATP13A4Q4VNC1 1196 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 INO80DQ53TQ3 878 aaPredicted RBP15.3■□□□□ 0.04
RNF4-210ENST00000508235 ANKRD20A8PQ5CZ79 823 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 FAM46CQ5VWP2 391 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 Q6ZVU0 165 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 CPNE8Q86YQ8 564 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 LRRC49Q8IUZ0 686 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 PLPP6Q8IY26 295 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 KIAA1524Q8TCG1 905 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 FAF2Q96CS3 445 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 CELF6Q96J87 481 aaKnown RBP15.3■□□□□ 0.04
RNF4-210ENST00000508235 ZC3H10Q96K80 434 aaKnown RBP15.3■□□□□ 0.04
RNF4-210ENST00000508235 SLC39A8Q9C0K1 460 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 LACRTQ9GZZ8 138 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 KLC2Q9H0B6 622 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 SLC6A17Q9H1V8 727 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 MTG2Q9H4K7 406 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 NCKAP1Q9Y2A7 1128 aa15.3■□□□□ 0.04
RNF4-210ENST00000508235 C1QTNF3-AMACRE9PGA6 284 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 K7ERQ8 282 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 DFFAO00273 331 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 KRT86O43790 486 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 NDUFS2O75306 463 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 ADH1BP00325 375 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 IGLV3-19P01714 112 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 KRT1P04264 644 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 CD48P09326 243 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 CCDC175P0C221 793 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 C5AR1P21730 350 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 IL4RP24394 825 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 TPMTP51580 245 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 MMRN1Q13201 1228 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 GSE1Q14687 1217 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 CST6Q15828 149 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 SPDYCQ5MJ68 293 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 LAIR1Q6GTX8 287 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 USP30Q70CQ3 517 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 LPCAT2Q7L5N7 544 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 KBTBD6Q86V97 674 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 SYCE1Q8N0S2 351 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 STK40Q8N2I9 435 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 RNF10Q8N5U6 811 aaKnown RBP15.29■□□□□ 0.04
RNF4-210ENST00000508235 NPWQ8N729 165 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 RLN3Q8WXF3 142 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 LOXL4Q96JB6 756 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 MAK16Q9BXY0 300 aaKnown RBP15.29■□□□□ 0.04
RNF4-210ENST00000508235 SP110Q9HB58 689 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 KLHL11Q9NVR0 708 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 UBA2Q9UBT2 640 aaPredicted RBP15.29■□□□□ 0.04
RNF4-210ENST00000508235 SALL4Q9UJQ4 1053 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 SMG5Q9UPR3 1016 aaKnown RBP15.29■□□□□ 0.04
RNF4-210ENST00000508235 ADGRG1Q9Y653 693 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 DUSP10Q9Y6W6 482 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 MUC6Q6W4X9 2439 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 SPAG17Q6Q759 2223 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 THADAQ6YHU6 1953 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 CEP192Q8TEP8 1941 aa15.29■□□□□ 0.04
RNF4-210ENST00000508235 IGHV1OR15-9A0A0B4J2B8 117 aa15.28■□□□□ 0.04
RNF4-210ENST00000508235 SMAD6O43541 496 aaKnown RBP15.28■□□□□ 0.04
RNF4-210ENST00000508235 BNIP3LO60238 219 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms