RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 NFKBIZQ9BYH8 718 aa13.66□□□□□ -0.22
SNCAIP-209ENST00000508017 UNKQ9C0B0 810 aaKnown RBP13.66□□□□□ -0.22
SNCAIP-209ENST00000508017 MAF1Q9H063 256 aa13.66□□□□□ -0.22
SNCAIP-209ENST00000508017 CHRAC1Q9NRG0 131 aa13.66□□□□□ -0.22
SNCAIP-209ENST00000508017 CDYLQ9Y232 598 aa13.66□□□□□ -0.22
SNCAIP-209ENST00000508017 RNF11Q9Y3C5 154 aa13.66□□□□□ -0.22
SNCAIP-209ENST00000508017 HEMK1Q9Y5R4 338 aaPredicted RBP13.66□□□□□ -0.22
SNCAIP-209ENST00000508017 COPG1Q9Y678 874 aaKnown RBP13.66□□□□□ -0.22
SNCAIP-209ENST00000508017 GJA3Q9Y6H8 435 aa13.66□□□□□ -0.22
SNCAIP-209ENST00000508017 CEPT1Q9Y6K0 416 aa13.66□□□□□ -0.22
SNCAIP-209ENST00000508017 NUP205Q92621 2012 aa13.66□□□□□ -0.22
SNCAIP-209ENST00000508017 A0A0J9YVX5 310 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 TCAF2A6NFQ2 919 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 CAPNS1P04632 268 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 ZNF26P17031 533 aaPredicted RBP13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 FGFR3P22607 806 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 LMO2P25791 158 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 PTPN3P26045 913 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 BST2Q10589 180 aaKnown RBP13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 MGAT5BQ3V5L5 792 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 GLRA4Q5JXX5 417 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 LIPMQ5VYY2 423 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 GK5Q6ZS86 529 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 PSTKQ8IV42 348 aaKnown RBP13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 SPNS2Q8IVW8 549 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 TMIGD2Q96BF3 282 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 SPATC1LQ9H0A9 340 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 SMARCAD1Q9H4L7 1026 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 SUDS3Q9H7L9 328 aaPredicted RBP13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 ZBTB26Q9HCK0 441 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 PDGFCQ9NRA1 345 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 FAM72CH0Y354 149 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 TSPAN1O60635 241 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 H2AFYO75367 372 aaKnown RBP13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 CSPG5O95196 566 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 AP2A1O95782 977 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 ZNF460Q14592 562 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 DCAF6Q58WW2 860 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 GJC2Q5T442 439 aaPredicted RBP13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 FAM72AQ5TYM5 149 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 ARHGAP17Q68EM7 881 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 FAM72DQ6L9T8 149 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 FAM72BQ86X60 149 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 CHERPQ8IWX8 916 aaKnown RBP13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 SPATA6LQ8N4H0 392 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 PCDH20Q8N6Y1 951 aaKnown RBP13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 CEP70Q8NHQ1 597 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 GAB3Q8WWW8 586 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 NLRP7Q8WX94 980 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 MCMBPQ9BTE3 642 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 PCDHAC1Q9H158 963 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 LIN28AQ9H9Z2 209 aaKnown RBP13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 DNAAF2Q9NVR5 837 aaKnown RBP13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 BFARQ9NZS9 450 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 GJD2Q9UKL4 321 aa13.65□□□□□ -0.22
SNCAIP-209ENST00000508017 BTBD19C9JJ37 291 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 ZBTB24O43167 697 aaPredicted RBP13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 CDH2P19022 906 aaPredicted RBP13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 NMBRP28336 390 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 MATKP42679 507 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 GALK1P51570 392 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 BCAT1P54687 386 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 EMP3P54852 163 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 NR1H2P55055 460 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 SNX16P57768 344 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 PRKAA1Q13131 559 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 ZNF618Q5T7W0 954 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 ANKRD52Q8NB46 1076 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 DLG3Q92796 817 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 ITFG2Q969R8 447 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 EME1Q96AY2 570 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 MLPHQ9BV36 600 aaPredicted RBP13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 IL22Q9GZX6 179 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 COQ10BQ9H8M1 238 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 EFCAB1Q9HAE3 211 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 CASS4Q9NQ75 786 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 UBP1Q9NZI7 540 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 ADA2Q9NZK5 511 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 PAPPA2Q9BXP8 1791 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 KCNU1A8MYU2 1149 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 TIMM44O43615 452 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 PFDN1O60925 122 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 PSMC3P17980 439 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 CD68P34810 354 aaPredicted RBP13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 CREB5Q02930 508 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 NME3Q13232 169 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 DPYSQ14117 519 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 PTK2BQ14289 1009 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 SLC25A52Q3SY17 297 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 FAM219BQ5XKK7 198 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 SETD3Q86TU7 594 aaPredicted RBP13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 SLC2A14Q8TDB8 520 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 DDI1Q8WTU0 396 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 APBA2Q99767 749 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 SNTG2Q9NY99 539 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 RCOR3Q9P2K3 495 aaPredicted RBP13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 BCAP29Q9UHQ4 241 aa13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 RUVBL2Q9Y230 463 aaKnown RBP13.64□□□□□ -0.23
SNCAIP-209ENST00000508017 ARHGAP10A1A4S6 786 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms