RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 MICALL1Q8N3F8 863 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 LRRC8CQ8TDW0 803 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 ZNF333Q96JL9 665 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 VAT1Q99536 393 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 SEZ6LQ9BYH1 1024 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 NSRP1Q9H0G5 558 aaKnown RBP12.42□□□□□ -0.42
LIN54-206ENST00000506560 NT5MQ9NPB1 228 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 NUMBLQ9Y6R0 609 aa12.42□□□□□ -0.42
LIN54-206ENST00000506560 IGLV3-10A0A075B6K4 115 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 CCT8L1PA6NM43 557 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 COCHO43405 550 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 KLKB1P03952 638 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 POLBP06746 335 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 GSTA2P09210 222 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 CLTBP09497 229 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 RPS24P62847 133 aaKnown RBP12.41□□□□□ -0.42
LIN54-206ENST00000506560 DSC2Q02487 901 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 PLD1Q13393 1074 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 SEPT7Q16181 437 aaKnown RBP12.41□□□□□ -0.42
LIN54-206ENST00000506560 CCDC121Q6ZUS5 278 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 OTOP2Q7RTS6 562 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 PGBD5Q8N414 524 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 MRGPRX2Q96LB1 330 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 CAB39LQ9H9S4 337 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 RC3H2Q9HBD1 1191 aaKnown RBP12.41□□□□□ -0.42
LIN54-206ENST00000506560 ZFATQ9P243 1243 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 PRKAG3Q9UGI9 489 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 MUSKO15146 869 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 EDF1O60869 148 aaKnown RBP12.41□□□□□ -0.42
LIN54-206ENST00000506560 ITGA2BP08514 1039 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 IRF1P10914 325 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 RHOQP17081 205 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 COG7P83436 770 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 NRG1Q02297 640 aaPredicted RBP12.41□□□□□ -0.42
LIN54-206ENST00000506560 LGI2Q8N0V4 545 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 UMODL1-AS1Q8N2C9 162 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 SLC25A41Q8N5S1 370 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 ATP6V0D2Q8N8Y2 350 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 TTC16Q8NEE8 873 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 FCRL5Q96RD9 977 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 SLC22A12Q96S37 553 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 TBL1YQ9BQ87 522 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 UBE2OQ9C0C9 1292 aaKnown RBP12.41□□□□□ -0.42
LIN54-206ENST00000506560 LRRC40Q9H9A6 602 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 TMEM248Q9NWD8 314 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 SMPD4Q9NXE4 827 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 ZNF840PA6NDX5 716 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 C2orf71A6NGG8 1288 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 WASH4PA8MWX3 477 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 NRG2O14511 850 aaPredicted RBP12.41□□□□□ -0.42
LIN54-206ENST00000506560 KRT38O76015 456 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 CCNFP41002 786 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 SERPINB4P48594 390 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 RPL10AP62906 217 aaKnown RBP12.41□□□□□ -0.42
LIN54-206ENST00000506560 PDE1CQ14123 709 aaPredicted RBP12.41□□□□□ -0.42
LIN54-206ENST00000506560 ITIH4Q14624 930 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 TRPM8Q7Z2W7 1104 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 DENND1CQ8IV53 801 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 SLC39A11Q8N1S5 342 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 LZTR1Q8N653 840 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 FITM2Q8N6M3 262 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.41□□□□□ -0.42
LIN54-206ENST00000506560 ALKBH8Q96BT7 664 aaKnown RBP12.41□□□□□ -0.42
LIN54-206ENST00000506560 ZNF689Q96CS4 500 aaPredicted RBP12.41□□□□□ -0.42
LIN54-206ENST00000506560 CYP2S1Q96SQ9 504 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 TTLL2Q9BWV7 592 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 IARS2Q9NSE4 1012 aaKnown RBP12.41□□□□□ -0.42
LIN54-206ENST00000506560 GGA2Q9UJY4 613 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 PLLPQ9Y342 182 aa12.41□□□□□ -0.42
LIN54-206ENST00000506560 MIA3Q5JRA6 1907 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 ANAPC1Q9H1A4 1944 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 TM9SF1O15321 606 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 UBOX5O94941 541 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 SOD2P04179 222 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 SLC2A3P11169 496 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 TACR2P21452 398 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 GLDCP23378 1020 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 ITKQ08881 620 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 CDH17Q12864 832 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 BTG3Q14201 252 aaPredicted RBP12.4□□□□□ -0.42
LIN54-206ENST00000506560 TEDDM1Q5T9Z0 273 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 ESRP1Q6NXG1 681 aaKnown RBP12.4□□□□□ -0.42
LIN54-206ENST00000506560 ZCCHC23Q6ZST2 131 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 ZNF461Q8TAF7 563 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 C20orf27Q9GZN8 174 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 MANSC1Q9H8J5 431 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 C20orf96Q9NUD7 363 aaPredicted RBP12.4□□□□□ -0.42
LIN54-206ENST00000506560 WBP1LQ9NX94 342 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 EMCNQ9ULC0 261 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 YIPF1Q9Y548 306 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 PTPRSQ13332 1948 aa12.4□□□□□ -0.42
LIN54-206ENST00000506560 CCL22O00626 93 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 PRKCGP05129 697 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 MMP2P08253 660 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 ARNTP27540 789 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 OR1E1P30953 314 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 ADRA1AP35348 466 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 CD86P42081 329 aa12.4□□□□□ -0.43
LIN54-206ENST00000506560 WDR5P61964 334 aaKnown RBP12.4□□□□□ -0.43
LIN54-206ENST00000506560 SPANXN3Q5MJ09 141 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms