RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 CYP4F2P78329 520 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CDK16Q00536 496 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CYP4F3Q08477 520 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 STK4Q13043 487 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CLN3Q13286 438 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ERV3-1Q14264 604 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 KPNB1Q14974 876 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 LTB4RQ15722 352 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 AANATQ16613 207 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SGO2Q562F6 1265 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SLC41A1Q8IVJ1 513 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 OR52H1Q8NGJ2 320 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 TCP10LQ8TDR4 215 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 STYXQ8WUJ0 223 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 FAM149B1Q96BN6 582 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 TXNDC15Q96J42 360 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 C7orf34Q96L11 122 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 FAM227BQ96M60 508 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF578Q96N58 590 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 TM9SF2Q99805 663 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 RIOX1Q9H6W3 641 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 RAVER2Q9HCJ3 691 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 MN1Q10571 1320 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 GMNCA6NCL1 334 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 H0YC42 278 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 NRP2O60462 931 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CDH16O75309 829 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 UBOX5O94941 541 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CNOT4O95628 575 aaKnown RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 SERPINB2P05120 415 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 THBS1P07996 1170 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 RCVRNP35243 200 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 SOX6P35712 828 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 UGT2B10P36537 528 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 MSH2P43246 934 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ME1P48163 572 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TPD52P55327 224 aaPredicted RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 SUMO3P55854 103 aaPredicted RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 IKQ13123 557 aaPredicted RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CNN3Q15417 329 aaKnown RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 Q3ZCU0 254 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 PAN2Q504Q3 1202 aaKnown RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 C1orf141Q5JVX7 400 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 MEX3CQ5U5Q3 659 aaKnown RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CFAP161Q6P656 301 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TMEM154Q6P9G4 183 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TOGARAM2Q6ZUX3 1019 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 UBE2R2Q712K3 238 aaPredicted RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 RHOUQ7L0Q8 258 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 MIGA2Q7L4E1 593 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 SYT13Q7L8C5 426 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 HAUS6Q7Z4H7 955 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CREG2Q8IUH2 290 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 VWA5B2Q8N398 1253 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 MARVELD2Q8N4S9 558 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 BVESQ8NE79 360 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 SUPT20HQ8NEM7 779 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 C1orf162Q8NEQ5 155 aaPredicted RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ASB12Q8WXK4 309 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 BSNDQ8WZ55 320 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 FAM89AQ96GI7 184 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 MASTLQ96GX5 879 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TMEM68Q96MH6 324 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TCEANC2Q96MN5 208 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CHCHD6Q9BRQ6 235 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ALG1Q9BT22 464 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 LMAN2LQ9H0V9 348 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 PABPC3Q9H361 631 aaKnown RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 LY9Q9HBG7 655 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CYP4F12Q9HCS2 524 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TLR8Q9NR97 1041 aaKnown RBP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 RIC8BQ9NVN3 520 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 SENP1Q9P0U3 644 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.32□□□□□ -2.04
NEDD4-205ENST00000506154 USP22Q9UPT9 525 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 PPIL1Q9Y3C6 166 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 A0A0X1KG70 313 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 FAM234BA2RU67 622 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 WNT10BO00744 389 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 PFDN6O15212 129 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 NDUFS2O75306 463 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 GCATO75600 419 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 UNC5CO95185 931 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 STARD3NLO95772 234 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 HLA-DRAP01903 254 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 EDN3P14138 238 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 PDGFRAP16234 1089 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TYRP1P17643 537 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 CSF2RBP32927 897 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 SLC1A1P43005 524 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 ABCG1P45844 678 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 STT3AP46977 705 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 GCNT1Q02742 428 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 UBXN1Q04323 297 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 AP1B1Q10567 949 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 TMEM177Q53S58 311 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 COLEC12Q5KU26 742 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 STRIP1Q5VSL9 837 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 KCTD16Q68DU8 428 aa2.32□□□□□ -2.04
NEDD4-205ENST00000506154 HIBCHQ6NVY1 386 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms