RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 TMPRSS4Q9NRS4 437 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 ARHGEF38Q9NXL2 777 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 HS3ST2Q9Y278 367 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 FARP1Q9Y4F1 1045 aaPredicted RBP11.66□□□□□ -0.54
SIL1-208ENST00000505945 AK5Q9Y6K8 562 aa11.66□□□□□ -0.54
SIL1-208ENST00000505945 MYLKQ15746 1914 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 A0A0D9SEW6 157 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 A0A1W2PQU0 124 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 RNF103O00237 685 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 KPNA3O00505 521 aaPredicted RBP11.65□□□□□ -0.54
SIL1-208ENST00000505945 TRIM38O00635 465 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 SMAD6O43541 496 aaKnown RBP11.65□□□□□ -0.54
SIL1-208ENST00000505945 RNGTTO60942 597 aaKnown RBP11.65□□□□□ -0.54
SIL1-208ENST00000505945 RHOCP08134 193 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 RRM1P23921 792 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 ITPKBP27987 946 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 CHRNA3P32297 505 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 SULT1E1P49888 294 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 BRMS1LQ5PSV4 323 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 PIP5KL1Q5T9C9 394 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 LINGO4Q6UY18 593 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 ZNF683Q8IZ20 524 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 SLC25A45Q8N413 288 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 CHST14Q8NCH0 376 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 ARRDC3Q96B67 414 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 NXPE2Q96DL1 559 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 C2orf49Q9BVC5 232 aaPredicted RBP11.65□□□□□ -0.54
SIL1-208ENST00000505945 PDCL3Q9H2J4 239 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 CAAP1Q9H8G2 361 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 PREBQ9HCU5 417 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.65□□□□□ -0.54
SIL1-208ENST00000505945 MPP6Q9NZW5 540 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 VPS51Q9UID3 782 aa11.65□□□□□ -0.54
SIL1-208ENST00000505945 SMG1Q96Q15 3661 aaKnown RBP11.65□□□□□ -0.54
SIL1-208ENST00000505945 GCN1Q92616 2671 aaKnown RBP11.64□□□□□ -0.55
SIL1-208ENST00000505945 TDRD6O60522 2096 aaKnown RBP11.64□□□□□ -0.55
SIL1-208ENST00000505945 BPTFQ12830 3046 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 DRGXA6NNA5 263 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 SIGLEC6O43699 453 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 TLX3O43711 291 aaPredicted RBP11.64□□□□□ -0.55
SIL1-208ENST00000505945 ENDOD1O94919 500 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 F9P00740 461 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 THEGLP0DJG4 465 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 GLDCP23378 1020 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 DGKAP23743 735 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 OR1E1P30953 314 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 DEUP1Q05D60 604 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 ILKQ13418 452 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 TPD52L1Q16890 204 aaPredicted RBP11.64□□□□□ -0.55
SIL1-208ENST00000505945 ZNF284Q2VY69 593 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 PROX2Q3B8N5 592 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 C2CD6Q53TS8 623 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 ARSIQ5FYB1 569 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 NEK5Q6P3R8 708 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 TFAP2DQ7Z6R9 452 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 ZDHHC17Q8IUH5 632 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 FAM71AQ8IYT1 594 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 TMEM145Q8NBT3 493 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 TMEM35BQ8NCS4 154 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 TMIEQ8NEW7 156 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 OR7D4Q8NG98 312 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 NT5C3BQ969T7 300 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 C18orf8Q96DM3 657 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 CCDC114Q96M63 670 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 TBCBQ99426 244 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 TNKS2Q9H2K2 1166 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 FZD3Q9NPG1 666 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 UCKL1Q9NWZ5 548 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 RRN3Q9NYV6 651 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 STAP1Q9ULZ2 295 aa11.64□□□□□ -0.55
SIL1-208ENST00000505945 SRGAP2O75044 1071 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 PCDH8O95206 1070 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 PRNPP04156 253 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 ACP1P24666 158 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 EIF2S3P41091 472 aaKnown RBP11.63□□□□□ -0.55
SIL1-208ENST00000505945 ABCG1P45844 678 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 CLDN2P57739 230 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 BPIFB4P59827 614 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 INSM1Q01101 510 aaPredicted RBP11.63□□□□□ -0.55
SIL1-208ENST00000505945 CCDC15Q0P6D6 951 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 KCNMA1Q12791 1236 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 ZNF211Q13398 564 aaPredicted RBP11.63□□□□□ -0.55
SIL1-208ENST00000505945 RAPGEF1Q13905 1077 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 DRAP1Q14919 205 aaPredicted RBP11.63□□□□□ -0.55
SIL1-208ENST00000505945 RTP5Q14D33 572 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 MAN2A1Q16706 1144 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 SLC25A52Q3SY17 297 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 HSP90AA4PQ58FG1 418 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 ARTNQ5T4W7 220 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 FAM102AQ5T9C2 384 aaPredicted RBP11.63□□□□□ -0.55
SIL1-208ENST00000505945 DPY19L2P1Q6NXN4 242 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 LRRC31Q6UY01 552 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 DPY19L3Q6ZPD9 716 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 SETD3Q86TU7 594 aaPredicted RBP11.63□□□□□ -0.55
SIL1-208ENST00000505945 HORMAD1Q86X24 394 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 ERICH1Q86X53 443 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 DCAF4L2Q8NA75 395 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 MLKLQ8NB16 471 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 OR13H1Q8NG92 308 aa11.63□□□□□ -0.55
SIL1-208ENST00000505945 GRIN3AQ8TCU5 1115 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms