RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 NAA25Q14CX7 972 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 NFIL3Q16649 462 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 ALFQ53S48 1182 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 ASPHD1Q5U4P2 390 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 ZKSCAN2Q63HK3 967 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 RETSATQ6NUM9 610 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 GJB7Q6PEY0 223 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 MMS22LQ6ZRQ5 1243 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 KDELC2Q7Z4H8 507 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 HEATR4Q86WZ0 1026 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 GPSM1Q86YR5 675 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 LSM14AQ8ND56 463 aaKnown RBP4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 ZNF548Q8NEK5 533 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 TMEM174Q8WUU8 243 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 FAR1Q8WVX9 515 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 RUFY2Q8WXA3 655 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 CENPIQ92674 756 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 VOPP1Q96AW1 172 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 EVI5LQ96CN4 794 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 CD180Q99467 661 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 TRMOQ9BU70 441 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 IFT27Q9BW83 186 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 LMAN2LQ9H0V9 348 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 ALKBH4Q9NXW9 302 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 ELOVL5Q9NYP7 299 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 PLEKHB1Q9UF11 243 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 CDH22Q9UJ99 828 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 PCDHA12Q9UN75 941 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 HS3ST3B1Q9Y662 390 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 MST1RQ04912 1400 aa4.37□□□□□ -1.71
TOPBP1-204ENST00000505804 NDUFB8O95169 186 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 HNRNPA1P09651 372 aaKnown RBP eCLIP4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 IFIT1P09914 478 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 VAMP2P63027 116 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 INPP5JQ15735 1006 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 SLC18A3Q16572 532 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 SYTL3Q4VX76 610 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 ZNF425Q6IV72 752 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 LRRC8DQ7L1W4 858 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 MRPL10Q7Z7H8 261 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 ADGRG6Q86SQ4 1221 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 SLC25A41Q8N5S1 370 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 IL17REQ8NFR9 667 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 SH3KBP1Q96B97 665 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 FRG2BQ96QU4 278 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 TMEM79Q9BSE2 394 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 FOXP1Q9H334 677 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 CXorf56Q9H5V9 222 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 ACTR5Q9H9F9 607 aaPredicted RBP4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 PNRC2Q9NPJ4 139 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 WASH6PQ9NQA3 447 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 ZDHHC7Q9NXF8 308 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 RNF7Q9UBF6 113 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 PGAP2Q9UHJ9 254 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 CNOT7Q9UIV1 285 aaKnown RBP4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 ANAPC4Q9UJX5 808 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 SLC13A4Q9UKG4 626 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 OSGIN2Q9Y236 505 aa4.36□□□□□ -1.71
TOPBP1-204ENST00000505804 TMEM272A0A1B0GTI8 110 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 A0A1B0GVC2 190 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 DDTLA6NHG4 134 aaPredicted RBP4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 HBP1O60381 514 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 TULP3O75386 442 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 MOSPD3O75425 235 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 TMCC1O94876 653 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 IL1AP01583 271 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 PAX3P23760 479 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 PSMC2P35998 433 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 PKP1Q13835 747 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 MANEAQ5SRI9 462 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 SLC9C2Q5TAH2 1124 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 NUGGCQ68CJ6 796 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 TRIM74Q86UV6 250 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 TRIM73Q86UV7 250 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 WDR5BQ86VZ2 330 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 FAM217AQ8IXS0 508 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 GHDCQ8N2G8 530 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 DPP10Q8N608 796 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 ARFGAP1Q8N6T3 406 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 NRACQ8N912 160 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 LRRC57Q8N9N7 239 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 RFWD2Q8NHY2 731 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 HDAC7Q8WUI4 952 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 HSPH1Q92598 858 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 CNOT9Q92600 299 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 ZBTB10Q96DT7 871 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 TEFMQ96QE5 360 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 TTYH1Q9H313 450 aaPredicted RBP4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 SLC32A1Q9H598 525 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 SEMA4BQ9NPR2 832 aaPredicted RBP4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 DECR2Q9NUI1 292 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 RAP2CQ9Y3L5 183 aa4.35□□□□□ -1.71
TOPBP1-204ENST00000505804 LY6G6EA0A0G2JKS1 128 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 PER2O15055 1255 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 ZC3H11AO75152 810 aaKnown RBP eCLIP4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 EPN2O95208 641 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 CHRM4P08173 479 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 TMEM191BP0C7N4 346 aa4.34□□□□□ -1.71
TOPBP1-204ENST00000505804 CDK4P11802 303 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms