RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 EEF1GP26641 437 aaKnown RBP13.49□□□□□ -0.25
DDX41-204ENST00000504807 CTSKP43235 329 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 AFF3P51826 1226 aaKnown RBP13.49□□□□□ -0.25
DDX41-204ENST00000504807 CLDN6P56747 220 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 TAS2R38P59533 333 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 PTP4A2Q12974 167 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 NCAPHQ15003 741 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 E2F5Q15329 346 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 TTC31Q49AM3 519 aaPredicted RBP13.49□□□□□ -0.25
DDX41-204ENST00000504807 RABGAP1LQ5R372 815 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 LINGO4Q6UY18 593 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 TFAP2DQ7Z6R9 452 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 ZNF557Q8N988 423 aaPredicted RBP13.49□□□□□ -0.25
DDX41-204ENST00000504807 JOSD2Q8TAC2 188 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 SLC30A5Q8TAD4 765 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 GANCQ8TET4 914 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 VOPP1Q96AW1 172 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 C18orf8Q96DM3 657 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 PGAP3Q96FM1 320 aaPredicted RBP13.49□□□□□ -0.25
DDX41-204ENST00000504807 SYNCQ9H7C4 482 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 OSGEPQ9NPF4 335 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 NLRC4Q9NPP4 1024 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 METTL5Q9NRN9 209 aaKnown RBP13.49□□□□□ -0.25
DDX41-204ENST00000504807 FAM207AQ9NSI2 230 aaPredicted RBP13.49□□□□□ -0.25
DDX41-204ENST00000504807 NEU3Q9UQ49 428 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 CEP83Q9Y592 693 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 TP53BP1Q12888 1972 aaPredicted RBP13.49□□□□□ -0.25
DDX41-204ENST00000504807 A0A1W2PPC4 97 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 FLRT2O43155 660 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 IL1BP01584 269 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 CYP1A1P04798 512 aaPredicted RBP13.48□□□□□ -0.25
DDX41-204ENST00000504807 SLC2A3P11169 496 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 SRCP12931 536 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 C6P13671 934 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 GRIA4P48058 902 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 POLR2FP61218 127 aaKnown RBP13.48□□□□□ -0.25
DDX41-204ENST00000504807 TLE3Q04726 772 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 DEUP1Q05D60 604 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 CCDC173Q0VFZ6 552 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 SLC12A1Q13621 1099 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 DLG2Q15700 870 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 C15orf59Q2T9L4 293 aaPredicted RBP13.48□□□□□ -0.25
DDX41-204ENST00000504807 SLC25A52Q3SY17 297 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 COLEC12Q5KU26 742 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 C6orf118Q5T5N4 469 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 TTC39BQ5VTQ0 682 aaPredicted RBP13.48□□□□□ -0.25
DDX41-204ENST00000504807 AGBL4Q5VU57 503 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 ERICH1Q86X53 443 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 FAM131BQ86XD5 332 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 SH2D3CQ8N5H7 860 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 OR7D4Q8NG98 312 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 NOX5Q96PH1 765 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 NDFIP2Q9NV92 336 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 ARHGAP20Q9P2F6 1191 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 VPS51Q9UID3 782 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 PPM1HQ9ULR3 514 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 FZD4Q9ULV1 537 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 CA5BQ9Y2D0 317 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 NOTCH2Q04721 2471 aa13.48□□□□□ -0.25
DDX41-204ENST00000504807 SPTAN1Q13813 2472 aaKnown RBP13.48□□□□□ -0.25
DDX41-204ENST00000504807 UBR5O95071 2799 aaPredicted RBP13.47□□□□□ -0.25
DDX41-204ENST00000504807 IGLV3-10A0A075B6K4 115 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 FAM72CH0Y354 149 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 CBX4O00257 560 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 TNFSF14O43557 240 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 ZNF821O75541 412 aaPredicted RBP13.47□□□□□ -0.25
DDX41-204ENST00000504807 MOCS3O95396 460 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 CER1O95813 267 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 CD160O95971 181 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 ZNF883P0CG24 379 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 GOT1P17174 413 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 MMP8P22894 467 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 RRM1P23921 792 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 SCNN1AP37088 669 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 CSRP3P50461 194 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 COPB1P53618 953 aaKnown RBP13.47□□□□□ -0.25
DDX41-204ENST00000504807 CDH4P55283 916 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 BPIFB4P59827 614 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 CNTN1Q12860 1018 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 ELAVL3Q14576 367 aaKnown RBP13.47□□□□□ -0.25
DDX41-204ENST00000504807 CCDC14Q49A88 953 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 BRMS1LQ5PSV4 323 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 FAM72AQ5TYM5 149 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 SMYD5Q6GMV2 418 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 FAM72DQ6L9T8 149 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.47□□□□□ -0.25
DDX41-204ENST00000504807 PRICKLE2Q7Z3G6 844 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 FAM72BQ86X60 149 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 ZDHHC17Q8IUH5 632 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 CHST14Q8NCH0 376 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 OR2T34Q8NGX1 318 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 OR14C36Q8NHC7 312 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 OMDQ99983 421 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 TRIM4Q9C037 500 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 WDCPQ9H6R7 721 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 SLC12A6Q9UHW9 1150 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 VPS28Q9UK41 221 aa13.47□□□□□ -0.25
DDX41-204ENST00000504807 COL5A1P20908 1838 aaPredicted RBP13.46□□□□□ -0.25
DDX41-204ENST00000504807 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.46□□□□□ -0.25
DDX41-204ENST00000504807 LATO43561 262 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms