RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CARNMT1Q8N4J0 409 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 SH2D3CQ8N5H7 860 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 CCDC33Q8N5R6 958 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 LZTR1Q8N653 840 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 PRELID2Q8N945 189 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 ACTL9Q8TC94 416 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 CSGALNACT1Q8TDX6 532 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 FAM3CQ92520 227 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 PTPRN2Q92932 1015 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 TADA1Q96BN2 335 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 RBM41Q96IZ5 413 aaKnown RBP5.05□□□□□ -1.6
LMNB1-208ENST00000504788 CELF6Q96J87 481 aaKnown RBP5.05□□□□□ -1.6
LMNB1-208ENST00000504788 XPO6Q96QU8 1125 aaKnown RBP5.05□□□□□ -1.6
LMNB1-208ENST00000504788 LGMNQ99538 433 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 GABRG3Q99928 467 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 HEMGNQ9BXL5 484 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 CHRDQ9H2X0 955 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 MTG2Q9H4K7 406 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 CATSPERBQ9H7T0 1116 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 TBC1D17Q9HA65 648 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 PRDM16Q9HAZ2 1276 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 SMARCAL1Q9NZC9 954 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 CEP192Q8TEP8 1941 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 CACNA1HO95180 2353 aa5.05□□□□□ -1.6
LMNB1-208ENST00000504788 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 H0Y626 953 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 SGK1O00141 431 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 MAN2B1O00754 1011 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 KCNK3O14649 394 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 TP73O15350 636 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 KIF5CO60282 957 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 RAMP2O60895 175 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 RNF40O75150 1001 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 GJB3O75712 270 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 RHOCP08134 193 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 DLDP09622 509 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 TNNT1P13805 278 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 AOC1P19801 751 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 COL9A1P20849 921 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 TGM2P21980 687 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 PRKCHP24723 683 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 SERPINH1P50454 418 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 COPAP53621 1224 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 NAP1L1P55209 391 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 GNG11P61952 73 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 OTUD4Q01804 1114 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 KDSRQ06136 332 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 SLC10A7Q0GE19 358 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 ZBTB17Q13105 803 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 NR1H3Q13133 447 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 ZNF177Q13360 481 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 CYTH1Q15438 398 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 INO80DQ53TQ3 878 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 RNF219Q5W0B1 726 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 GRAMD4Q6IC98 578 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 KIAA1211LQ6NV74 962 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 RWDD4Q6NW29 188 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 DRICH1Q6PGQ1 229 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 TMCO3Q6UWJ1 677 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 ZNF852Q6ZMS4 543 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 ZNF572Q7Z3I7 529 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 MAP7D3Q8IWC1 876 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 SYNPOQ8N3V7 929 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 TMEM105Q8N8V8 129 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 ZNF557Q8N988 423 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 GLIS1Q8NBF1 620 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 ACTRT1Q8TDG2 376 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 KCNV2Q8TDN2 545 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 CYB5D2Q8WUJ1 264 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 NELL1Q92832 810 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 NKD2Q969F2 451 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 RTP4Q96DX8 246 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 MS4A14Q96JA4 679 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 RPL10LQ96L21 214 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 ALS2CR12Q96Q35 445 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 IL12RB2Q99665 862 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 LHX3Q9UBR4 397 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 ERVW-1Q9UQF0 538 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 PLXNA2O75051 1894 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 ZNF106Q9H2Y7 1883 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 BHMG1C9JSJ3 638 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 K7ESF4 209 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 TNFRSF10AO00220 468 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 GPR37L1O60883 481 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 PAPSS2O95340 614 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 FGGP02679 453 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 CTSLP07711 333 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 SRPRAP08240 638 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 MMP2P08253 660 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 DESP17661 470 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 CCNCP24863 283 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 CD68P34810 354 aaPredicted RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 DEKP35659 375 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 SSR1P43307 286 aaKnown RBP5.04□□□□□ -1.6
LMNB1-208ENST00000504788 NR2C2P49116 596 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 DNA2P51530 1060 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 GDF10P55107 478 aa5.04□□□□□ -1.6
LMNB1-208ENST00000504788 IFI35P80217 286 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms