RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 SOX5P35711 763 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 CLDN6P56747 220 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 CDR2Q01850 454 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 SCAPQ12770 1279 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 SFSWAPQ12872 951 aaKnown RBP13.1□□□□□ -0.31
RNF4-206ENST00000504782 PTP4A2Q12974 167 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 BNIP3Q12983 259 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 CDO1Q16878 200 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 CCDC14Q49A88 953 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 CCDC157Q569K6 752 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 CT47A1Q5JQC4 288 aaPredicted RBP13.1□□□□□ -0.31
RNF4-206ENST00000504782 PIP5KL1Q5T9C9 394 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 CCNI2Q6ZMN8 369 aaPredicted RBP13.1□□□□□ -0.31
RNF4-206ENST00000504782 ATP11CQ8NB49 1132 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 KLK6Q92876 244 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 ELF4Q99607 663 aaPredicted RBP13.1□□□□□ -0.31
RNF4-206ENST00000504782 C11orf70Q9BRQ4 267 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 HSD3B7Q9H2F3 369 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 NDFIP2Q9NV92 336 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 APOBEC2Q9Y235 224 aaKnown RBP13.1□□□□□ -0.31
RNF4-206ENST00000504782 COL5A1P20908 1838 aaPredicted RBP13.1□□□□□ -0.31
RNF4-206ENST00000504782 FAM149AA5PLN7 773 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 FAM72CH0Y354 149 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 ZMPSTE24O75844 475 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 CD160O95971 181 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 MMP8P22894 467 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 OR1E1P30953 314 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 CHRNA3P32297 505 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 COPB1P53618 953 aaKnown RBP13.09□□□□□ -0.31
RNF4-206ENST00000504782 KRT83P78385 493 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 MTA1Q13330 715 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 SUZ12Q15022 739 aaKnown RBP13.09□□□□□ -0.31
RNF4-206ENST00000504782 SYCP1Q15431 976 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 FAM72AQ5TYM5 149 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 FAM72DQ6L9T8 149 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 LRSAM1Q6UWE0 723 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 LRRC31Q6UY01 552 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 SETD3Q86TU7 594 aaPredicted RBP13.09□□□□□ -0.31
RNF4-206ENST00000504782 FAM72BQ86X60 149 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 SAP25Q8TEE9 199 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 RXFP2Q8WXD0 754 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 HAPLN3Q96S86 360 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 CDC6Q99741 560 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 MYOCQ99972 504 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 SPON2Q9BUD6 331 aa13.09□□□□□ -0.31
RNF4-206ENST00000504782 TDRD6O60522 2096 aaKnown RBP13.09□□□□□ -0.31
RNF4-206ENST00000504782 TMEM8BA6NDV4 472 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 TLR4O00206 839 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 ALOX15BO15296 676 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 ZZEF1O43149 2961 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 TNFSF14O43557 240 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 RNGTTO60942 597 aaKnown RBP13.08□□□□□ -0.32
RNF4-206ENST00000504782 UNGP13051 313 aaPredicted RBP13.08□□□□□ -0.32
RNF4-206ENST00000504782 ACVRL1P37023 503 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 GRK6P43250 576 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 NXPH1P58417 271 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 ARF5P84085 180 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 DNAJC3Q13217 504 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 ARSIQ5FYB1 569 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 FAM46CQ5VWP2 391 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 NAPEPLDQ6IQ20 393 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 C22orf39Q6P5X5 142 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 TMPRSS7Q7RTY8 843 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 APTXQ7Z2E3 356 aaKnown RBP13.08□□□□□ -0.32
RNF4-206ENST00000504782 DSG4Q86SJ6 1040 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 DRC7Q8IY82 874 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 CCDC185Q8N715 623 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 DCAF4L2Q8NA75 395 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 MDM1Q8TC05 714 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 GRIN3AQ8TCU5 1115 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 PPP1R9BQ96SB3 815 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 C2orf49Q9BVC5 232 aaPredicted RBP13.08□□□□□ -0.32
RNF4-206ENST00000504782 ZYG11BQ9C0D3 744 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 FZD3Q9NPG1 666 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 LIMA1Q9UHB6 759 aaKnown RBP13.08□□□□□ -0.32
RNF4-206ENST00000504782 NEU3Q9UQ49 428 aa13.08□□□□□ -0.32
RNF4-206ENST00000504782 FCF1Q9Y324 198 aaKnown RBP13.08□□□□□ -0.32
RNF4-206ENST00000504782 MYLKQ15746 1914 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 C2CD4BA6NLJ0 364 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 C1QTNF3-AMACRE9PGA6 284 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 KPNA3O00505 521 aaPredicted RBP13.07□□□□□ -0.32
RNF4-206ENST00000504782 SLC7A4O43246 635 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 PRLRP16471 622 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 RFC1P35251 1148 aaPredicted RBP13.07□□□□□ -0.32
RNF4-206ENST00000504782 ADRA1BP35368 520 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 ANP32AP39687 249 aaKnown RBP13.07□□□□□ -0.32
RNF4-206ENST00000504782 GNA12Q03113 381 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 NCAPHQ15003 741 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 C6orf118Q5T5N4 469 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 MANEALQ5VSG8 457 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 DHRS13Q6UX07 377 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 LEKR1Q6ZMV7 388 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 DPY19L3Q6ZPD9 716 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 ARCQ7LC44 396 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 KANSL1Q7Z3B3 1105 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 PRPF39Q86UA1 669 aaKnown RBP13.07□□□□□ -0.32
RNF4-206ENST00000504782 TRIM69Q86WT6 500 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 ZNF677Q86XU0 584 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 PYROXD2Q8N2H3 581 aa13.07□□□□□ -0.32
RNF4-206ENST00000504782 EID2Q8N6I1 236 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms