RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 C5orf22Q49AR2 442 aa6.41□□□□□ -1.38
UBE2D3-217ENST00000504211 FAM171A1Q5VUB5 890 aa6.41□□□□□ -1.38
UBE2D3-217ENST00000504211 KDELC2Q7Z4H8 507 aa6.41□□□□□ -1.38
UBE2D3-217ENST00000504211 ARFGAP1Q8N6T3 406 aa6.41□□□□□ -1.38
UBE2D3-217ENST00000504211 USP13Q92995 863 aaPredicted RBP6.41□□□□□ -1.38
UBE2D3-217ENST00000504211 CADM1Q9BY67 442 aaKnown RBP6.41□□□□□ -1.38
UBE2D3-217ENST00000504211 ZNF304Q9HCX3 659 aa6.41□□□□□ -1.38
UBE2D3-217ENST00000504211 TLR8Q9NR97 1041 aaKnown RBP6.41□□□□□ -1.38
UBE2D3-217ENST00000504211 RRN3Q9NYV6 651 aa6.41□□□□□ -1.38
UBE2D3-217ENST00000504211 PCDHA12Q9UN75 941 aa6.41□□□□□ -1.38
UBE2D3-217ENST00000504211 OSGIN2Q9Y236 505 aa6.41□□□□□ -1.38
UBE2D3-217ENST00000504211 CHD1O14646 1710 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 CYP2J2P51589 502 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 CCR5P51681 352 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 ARHGAP8P85298 464 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 TLE2Q04725 743 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 CHRNDQ07001 517 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 GOLGA8FQ08AF8 430 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 PMPCAQ10713 525 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 C6orf10Q5SRN2 563 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 GJB7Q6PEY0 223 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 SCAIQ8N9R8 606 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 NCSTNQ92542 709 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 RNFT2Q96EX2 444 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 AAMDCQ9H7C9 122 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 ACAD9Q9H845 621 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 ACTR5Q9H9F9 607 aaPredicted RBP6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 SEMA4BQ9NPR2 832 aaPredicted RBP6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 RNF146Q9NTX7 359 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 TMEM160Q9NX00 188 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 ELOVL5Q9NYP7 299 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 LRRFIP2Q9Y608 721 aaKnown RBP6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 HS3ST3B1Q9Y662 390 aa6.4□□□□□ -1.38
UBE2D3-217ENST00000504211 DISP1Q96F81 1524 aa6.4□□□□□ -1.39
UBE2D3-217ENST00000504211 SOCS2O14508 198 aa6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 TMEM191BP0C7N4 346 aa6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 MTNR1AP48039 350 aa6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 BYSLQ13895 437 aaKnown RBP6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 TWIST1Q15672 202 aa6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 INPP5JQ15735 1006 aaPredicted RBP6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 ALG10Q5BKT4 473 aa6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 ALG10BQ5I7T1 473 aa6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 IGFN1Q86VF2 1251 aa6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 CCDC25Q86WR0 208 aa6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 HDAC7Q8WUI4 952 aa6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 SMG7Q92540 1137 aaKnown RBP6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 CTDSP1Q9GZU7 261 aa6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 HDAC6Q9UBN7 1215 aa6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 DHX57Q6P158 1386 aaKnown RBP6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 NUP160Q12769 1436 aa6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 EPRSP07814 1512 aaKnown RBP6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 ADCY10Q96PN6 1610 aa6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 PTPN23Q9H3S7 1636 aa6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 GCC2Q8IWJ2 1684 aa6.39□□□□□ -1.39
UBE2D3-217ENST00000504211 TRBV5-7A0A0A0MS05 114 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 A6NNC1 897 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 KLK10O43240 276 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 CREB3O43889 395 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 FGF2P09038 288 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 FCGR2AP12318 317 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 CPA1P15085 419 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 PRKCHP24723 683 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 PTGER1P34995 402 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 ME1P48163 572 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 AAGABQ6PD74 315 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 MMP21Q8N119 569 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 NRACQ8N912 160 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 SH3KBP1Q96B97 665 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 STN1Q9H668 368 aaKnown RBP6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 PNRC2Q9NPJ4 139 aaKnown RBP6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 ZBTB40Q9NUA8 1239 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 RNF7Q9UBF6 113 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 PGAP2Q9UHJ9 254 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 MTUS2Q5JR59 1369 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 NCOA2Q15596 1464 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 MAGI3Q5TCQ9 1506 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 ITSN2Q9NZM3 1697 aa6.38□□□□□ -1.39
UBE2D3-217ENST00000504211 FGD6Q6ZV73 1430 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 SETD5Q9C0A6 1442 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 A0A1W2PPC1 479 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 FAM90A7PA6NKC0 464 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 FAM90A22PA8MWA6 464 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 FAM90A12PA8MX19 464 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 FAM90A23PA8MXZ1 464 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 EPN2O95208 641 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 DDAH2O95865 285 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 TNFRSF1BP20333 461 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 SLC16A2P36021 539 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 NR4A2P43354 598 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 MAPK9P45984 424 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 ALDH7A1P49419 539 aaKnown RBP6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 VAMP2P63027 116 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 TBL3Q12788 808 aaKnown RBP6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 LAMB3Q13751 1172 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 PKP1Q13835 747 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 IL13RA2Q14627 380 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 AP5B1Q2VPB7 878 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 WDR45BQ5MNZ6 344 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 ENTPD8Q5MY95 495 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms