RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	NMRK2	Q9NPI5	230 aa		13.27	□□□□□ -0.28
MATR3-233	ENST00000504203	NDFIP2	Q9NV92	336 aa		13.27	□□□□□ -0.28
MATR3-233	ENST00000504203	PNPO	Q9NVS9	261 aa		13.27	□□□□□ -0.28
MATR3-233	ENST00000504203	DNAJC28	Q9NX36	388 aa		13.27	□□□□□ -0.28
MATR3-233	ENST00000504203	LRRC42	Q9Y546	428 aa		13.27	□□□□□ -0.28
MATR3-233	ENST00000504203	PCDHB12	Q9Y5F1	795 aa		13.27	□□□□□ -0.28
MATR3-233	ENST00000504203	ARHGEF37	A1IGU5	675 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	SPECC1L-ADORA2A	F8WAN1	911 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203		H0Y3Z8	333 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	MATN3	O15232	486 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	MSI1	O43347	362 aa	Known RBP	13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	B4GALT3	O60512	393 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	MT-CYB	P00156	380 aa	Predicted RBP	13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	PGM1	P36871	562 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	RCN2	Q14257	317 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	PPP2R5D	Q14738	602 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	AFMID	Q63HM1	303 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	PDPK2P	Q6A1A2	396 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	ZC3HC1	Q86WB0	502 aa	Known RBP	13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	13.27	□□□□□ -0.29	5e-6	■■■□□ 17.5
MATR3-233	ENST00000504203	ARHGAP24	Q8N264	748 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	PPP4R1	Q8TF05	950 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	N4BP2L2	Q92802	583 aa	Predicted RBP	13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	TBL1Y	Q9BQ87	522 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	C1orf21	Q9H246	121 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	FAM96A	Q9H5X1	160 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	CATSPERB	Q9H7T0	1116 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	NMUR1	Q9HB89	426 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	GLOD4	Q9HC38	313 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	PCDHB8	Q9UN66	801 aa		13.27	□□□□□ -0.29
MATR3-233	ENST00000504203	KCNU1	A8MYU2	1149 aa		13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	CA12	O43570	354 aa		13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	ANXA9	O76027	345 aa		13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	CST5	P28325	142 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	GRIK1	P39086	918 aa		13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	HADHA	P40939	763 aa		13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	PTDSS1	P48651	473 aa	Known RBP	13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	IDH3A	P50213	366 aa		13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	YWHAH	Q04917	246 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	KDSR	Q06136	332 aa		13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	GRM3	Q14832	879 aa		13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	PCID2	Q5JVF3	399 aa		13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	PKN3	Q6P5Z2	889 aa		13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	MAB21L3	Q8N8X9	362 aa		13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	NSMCE4A	Q9NXX6	385 aa		13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	APOBEC2	Q9Y235	224 aa	Known RBP	13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.26	□□□□□ -0.29
MATR3-233	ENST00000504203	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	GOLGA8T	H3BQL2	631 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	OR4Q2	P0C623	313 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	MYL4	P12829	197 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	GABRB3	P28472	473 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	ADRA1A	P35348	466 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	GCK	P35557	465 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	NRG1	Q02297	640 aa	Predicted RBP	13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	SREBF2	Q12772	1141 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	NAPRT	Q6XQN6	538 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	CNTN4	Q8IWV2	1026 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	TMEM151A	Q8N4L1	468 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	C1QTNF1	Q9BXJ1	281 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	RHOJ	Q9H4E5	214 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	NMRAL1	Q9HBL8	299 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	TRMT13	Q9NUP7	481 aa	Known RBP	13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	SQOR	Q9Y6N5	450 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	TM7SF2	O76062	418 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	CCND3	P30281	292 aa	Predicted RBP	13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	CPOX	P36551	454 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	ARCN1	P48444	511 aa	Known RBP	13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	ANO4	Q32M45	955 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.25	□□□□□ -0.29	4e-16	■■□□□ 14.4
MATR3-233	ENST00000504203	RTL3	Q8N8U3	475 aa	Known RBP	13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	OSER1	Q9NX31	292 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	NUDT5	Q9UKK9	219 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	HS3ST4	Q9Y661	456 aa		13.25	□□□□□ -0.29
MATR3-233	ENST00000504203	MYO16	Q9Y6X6	1858 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203		A0A1W2PQH9	124 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	WASH4P	A8MWX3	477 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	TMEM114	B3SHH9	223 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203		E9PAM4	449 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	TRIM13	O60858	407 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	SIN3B	O75182	1162 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	KRT36	O76013	467 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	DDHD2	O94830	711 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	OAZ2	O95190	189 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	KLHL2	O95198	593 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	AHSG	P02765	367 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	HLA-DQB2	P05538	268 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	SBK3	P0C264	359 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	ARNT	P27540	789 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	TM4SF4	P48230	202 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	TUB	P50607	506 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	MLLT6	P55198	1093 aa	Predicted RBP	13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	PRKCZ	Q05513	592 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	DSC1	Q08554	894 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms