RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 BST1Q10588 318 aa16.39■□□□□ 0.22
HMGXB3-202ENST00000503427 ARMCX4Q5H9R4 360 aa16.39■□□□□ 0.22
HMGXB3-202ENST00000503427 PRRG3Q9BZD7 231 aa16.39■□□□□ 0.22
HMGXB3-202ENST00000503427 STN1Q9H668 368 aaKnown RBP16.39■□□□□ 0.22
HMGXB3-202ENST00000503427 SF3B1O75533 1304 aaKnown RBP eCLIP16.39■□□□□ 0.215e-6■■■■■ 133
HMGXB3-202ENST00000503427 PAX7P23759 505 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 PSMB4P28070 264 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 MRPS22P82650 360 aaKnown RBP16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 CLVS1Q8IUQ0 354 aaPredicted RBP16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 ZNF557Q8N988 423 aaPredicted RBP16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 CIPCQ9C0C6 399 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 MARCH2Q9P0N8 246 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 PTCH2Q9Y6C5 1203 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 PSMD12O00232 456 aaPredicted RBP16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 PTDSS1P48651 473 aaKnown RBP16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 ALG3Q92685 438 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 MTERF3Q96E29 417 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 NALCNQ8IZF0 1738 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 XYLBO75191 536 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 ERBB2P04626 1255 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 PSMB9P28065 219 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 PSEN1P49768 467 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 ALDH6A1Q02252 535 aaKnown RBP16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 PWP1Q13610 501 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 STK32CQ86UX6 486 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 LGI2Q8N0V4 545 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 BTN2A2Q8WVV5 523 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 LENG9Q96B70 501 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 ZNF670Q9BS34 389 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 SNRNP25Q9BV90 132 aaKnown RBP16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 NIFKQ9BYG3 293 aaKnown RBP16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 ATXN3LQ9H3M9 355 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 STMN3Q9NZ72 180 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 LNPEPQ9UIQ6 1025 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 ATXN2Q99700 1313 aaKnown RBP16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 BIRC5O15392 142 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 NOMO2Q5JPE7 1267 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 FAM183BPQ6ZVS7 135 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 OR52K1Q8NGK4 314 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 KLHL25Q9H0H3 589 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 ST3GAL5Q9UNP4 418 aa16.39■□□□□ 0.21
HMGXB3-202ENST00000503427 B4GALT5O43286 388 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 PEX1O43933 1283 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 ZBTB48P10074 688 aaPredicted RBP16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 ARL4DP49703 201 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 CLK2P49760 499 aaKnown RBP16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 SERPINH1P50454 418 aaKnown RBP16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 SLC16A1P53985 500 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 PKNOX1P55347 436 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 C1DQ13901 141 aaKnown RBP16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 HSDL1Q3SXM5 330 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 GJC2Q5T442 439 aaPredicted RBP16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 PIGZQ86VD9 579 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 BHLHE22Q8NFJ8 381 aaPredicted RBP16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 APOL4Q9BPW4 351 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 PHACTR1Q9C0D0 580 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 MORF4L1Q9UBU8 362 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 AP3M1Q9Y2T2 418 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 NRXN3Q9Y4C0 1643 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 PDZK1P1A8MUH7 402 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 TRIM24O15164 1050 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 B4GALT4O60513 344 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 KATNA1O75449 491 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 LCA5LO95447 670 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 NEK3P51956 506 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 MILR1Q7Z6M3 343 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 TRABD2AQ86V40 505 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 ZSCAN18Q8TBC5 510 aaPredicted RBP16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 MIEF2Q96C03 454 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 LIMD1Q9UGP4 676 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 ZNF862O60290 1169 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 ARF4P18085 180 aaPredicted RBP16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 CYP2A7P20853 494 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 LRPAP1P30533 357 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 RXRGP48443 463 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 NAGLUP54802 743 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 DDR2Q16832 855 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 ACTRT2Q8TDY3 377 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 TPRKBQ9Y3C4 175 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 DLG5Q8TDM6 1919 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 FAM20BO75063 409 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 SERPINI2O75830 405 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 PCNAP12004 261 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 PRKAR2AP13861 404 aaKnown RBP16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 VCLP18206 1134 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 PLK1P53350 603 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 SLC25A3Q00325 362 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 ARMC6Q6NXE6 501 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 GLT6D1Q7Z4J2 308 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 TOP6BLQ8N6T0 577 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 EBNA1BP2Q99848 306 aaKnown RBP16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 OR12D3Q9UGF7 316 aa16.38■□□□□ 0.21
HMGXB3-202ENST00000503427 ATG7O95352 703 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 LTA4HP09960 611 aaKnown RBP16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 ATP5C1P36542 298 aaKnown RBP16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 CEP78Q5JTW2 689 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 UNC5AQ6ZN44 842 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 C11orf74Q86VG3 221 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 NDEL1Q9GZM8 345 aa16.37■□□□□ 0.21
HMGXB3-202ENST00000503427 PAIP1Q9H074 479 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms