RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 PGBD3Q8N328 593 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 CAMKK1Q8N5S9 505 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 PQLC3Q8N755 202 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 FRS2Q8WU20 508 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 FAF2Q96CS3 445 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 DDX56Q9NY93 547 aaKnown RBP16.85■□□□□ 0.29
SCLT1-205ENST00000503401 DONSONQ9NYP3 566 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 HS3ST2Q9Y278 367 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 FCF1Q9Y324 198 aaKnown RBP16.85■□□□□ 0.29
SCLT1-205ENST00000503401 SDK1Q7Z5N4 2213 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 J3KR12 359 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 ATP9BO43861 1147 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 MFSD11O43934 449 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 ALDH1A2O94788 518 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 SERPINH1P50454 418 aaKnown RBP16.84■□□□□ 0.29
SCLT1-205ENST00000503401 COPAP53621 1224 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 CCDC173Q0VFZ6 552 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 CAMK2GQ13555 558 aaPredicted RBP16.84■□□□□ 0.29
SCLT1-205ENST00000503401 C9orf64Q5T6V5 341 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 NCBP2-AS2Q69YL0 99 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 Q6ZVU0 165 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 RNF10Q8N5U6 811 aaKnown RBP16.84■□□□□ 0.29
SCLT1-205ENST00000503401 KDM1BQ8NB78 822 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 PTPRN2Q92932 1015 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 TNKS2Q9H2K2 1166 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 FAM86C1Q9NVL1 165 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 SUN2Q9UH99 717 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 R4GN57 208 aa16.84■□□□□ 0.29
SCLT1-205ENST00000503401 ARHGAP42A6NI28 874 aa16.83■□□□□ 0.28
SCLT1-205ENST00000503401 CTNNA1P35221 906 aaKnown RBP16.83■□□□□ 0.28
SCLT1-205ENST00000503401 SRSF5Q13243 272 aaKnown RBP16.83■□□□□ 0.28
SCLT1-205ENST00000503401 ZNF528Q3MIS6 628 aa16.83■□□□□ 0.28
SCLT1-205ENST00000503401 PEX26Q7Z412 305 aa16.83■□□□□ 0.28
SCLT1-205ENST00000503401 RASSF3Q86WH2 238 aa16.83■□□□□ 0.28
SCLT1-205ENST00000503401 KATNAL2Q8IYT4 538 aa16.83■□□□□ 0.28
SCLT1-205ENST00000503401 MRGPRX1Q96LB2 322 aa16.83■□□□□ 0.28
SCLT1-205ENST00000503401 RNF157Q96PX1 679 aa16.83■□□□□ 0.28
SCLT1-205ENST00000503401 CD93Q9NPY3 652 aa16.83■□□□□ 0.28
SCLT1-205ENST00000503401 AMFRQ9UKV5 643 aa16.83■□□□□ 0.28
SCLT1-205ENST00000503401 INVSQ9Y283 1065 aa16.83■□□□□ 0.28
SCLT1-205ENST00000503401 EDDM13A0A1B0GTR0 161 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 AXIN1O15169 862 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 KRT10P13645 584 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 HOXA6P31267 233 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 DNA2P51530 1060 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 PTPN5P54829 565 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 DYNLT1P63172 113 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 KAZNQ674X7 775 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 KIAA1324Q6UXG2 1013 aaKnown RBP16.82■□□□□ 0.28
SCLT1-205ENST00000503401 RFX6Q8HWS3 928 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 TMPRSS6Q8IU80 811 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 CCDC50Q8IVM0 306 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 SYCE1Q8N0S2 351 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 STK40Q8N2I9 435 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 LZTR1Q8N653 840 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 OR2T3Q8NH03 318 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 LRRN4Q8WUT4 740 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 RLN3Q8WXF3 142 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 NELL1Q92832 810 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 ATOH1Q92858 354 aaPredicted RBP16.82■□□□□ 0.28
SCLT1-205ENST00000503401 ZSCAN32Q9NX65 697 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 EBF1Q9UH73 591 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.82■□□□□ 0.28
SCLT1-205ENST00000503401 PCDHA3Q9Y5H8 950 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 ABCA7Q8IZY2 2146 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 NUMA1Q14980 2115 aa16.82■□□□□ 0.28
SCLT1-205ENST00000503401 ZNF821O75541 412 aaPredicted RBP16.81■□□□□ 0.28
SCLT1-205ENST00000503401 CTNNA2P26232 953 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 SERPINB6P35237 376 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 CDKN2BP42772 138 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 VASPP50552 380 aaPredicted RBP16.81■□□□□ 0.28
SCLT1-205ENST00000503401 NRLP54845 237 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 GBE1Q04446 702 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 C22orf39Q6P5X5 142 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 SPOCD1Q6ZMY3 1216 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 ZNF662Q6ZS27 426 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 LONP2Q86WA8 852 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 FRMD1Q8N878 549 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.81■□□□□ 0.28
SCLT1-205ENST00000503401 ALG3Q92685 438 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 MAK16Q9BXY0 300 aaKnown RBP16.81■□□□□ 0.28
SCLT1-205ENST00000503401 TM6SF2Q9BZW4 377 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 PRDM16Q9HAZ2 1276 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 SP110Q9HB58 689 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 PDFQ9HBH1 243 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 TARSL2A2RTX5 802 aaKnown RBP16.81■□□□□ 0.28
SCLT1-205ENST00000503401 ZBTB24O43167 697 aaPredicted RBP16.81■□□□□ 0.28
SCLT1-205ENST00000503401 PRAMEF11O60813 436 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 TMCC1O94876 653 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 ZRANB2O95218 330 aaKnown RBP eCLIP16.81■□□□□ 0.28
SCLT1-205ENST00000503401 PEX5P50542 639 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 CLCN6P51797 869 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 SLC20A2Q08357 652 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 ADCY2Q08462 1091 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 SLC10A2Q12908 348 aaPredicted RBP16.81■□□□□ 0.28
SCLT1-205ENST00000503401 PAFAH1B3Q15102 231 aaKnown RBP16.81■□□□□ 0.28
SCLT1-205ENST00000503401 AADACL2Q6P093 401 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 SPAG17Q6Q759 2223 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 WDR5BQ86VZ2 330 aa16.81■□□□□ 0.28
SCLT1-205ENST00000503401 MMAAQ8IVH4 418 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms