RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 SNX27Q96L92 541 aa2.3□□□□□ -2.04
SGMS1-205ENST00000498514 MOV10L1Q9BXT6 1211 aaKnown RBP2.3□□□□□ -2.04
SGMS1-205ENST00000498514 CDH19Q9H159 772 aa2.3□□□□□ -2.04
SGMS1-205ENST00000498514 ZNF334Q9HCZ1 680 aaPredicted RBP2.3□□□□□ -2.04
SGMS1-205ENST00000498514 CYP3A7-CYP3A51PA0A087WV96 503 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 A0A1B0GVM2 712 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 C17orf102A2RUQ5 167 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 KDM4EB2RXH2 506 aaPredicted RBP2.29□□□□□ -2.04
SGMS1-205ENST00000498514 M0QYT0 321 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 CYP3A4P08684 503 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 CYP3A7P24462 503 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 FOXL2P58012 376 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 FAM193AP78312 1265 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 PKP1Q13835 747 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 DAG1Q14118 895 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 CTTNQ14247 550 aaKnown RBP2.29□□□□□ -2.04
SGMS1-205ENST00000498514 TMEM30BQ3MIR4 351 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 ARHGAP29Q52LW3 1261 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 FAM171A1Q5VUB5 890 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 CXorf57Q6NSI4 855 aaKnown RBP2.29□□□□□ -2.04
SGMS1-205ENST00000498514 PPP4R4Q6NUP7 873 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 SLC26A9Q7LBE3 791 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 ZDHHC23Q8IYP9 409 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 MAPK1IP1LQ8NDC0 245 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 FAM110DQ8TAY7 271 aaPredicted RBP2.29□□□□□ -2.04
SGMS1-205ENST00000498514 BTBD1Q9H0C5 482 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 PNPLA8Q9NP80 782 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 ARL15Q9NXU5 204 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 CDH22Q9UJ99 828 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 SLC12A4Q9UP95 1085 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 ZBTB1Q9Y2K1 713 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 SNX13Q9Y5W8 968 aa2.29□□□□□ -2.04
SGMS1-205ENST00000498514 LOC105369274A0A096LPK9 316 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 LOC102723532A0A0G2JNH3 316 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 PNMA6EA0A0J9YXQ4 647 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 DYTNA2CJ06 578 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 HNRNPCL2B2RXH8 293 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 J3KTA2 159 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 TAF5LO75529 589 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 HRGP04196 525 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 PEPDP12955 493 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 EGR1P18146 543 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 GRK5P34947 590 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 TIMP3P35625 211 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 HSD17B4P51659 736 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 NR0B1P51843 470 aaKnown RBP2.28□□□□□ -2.04
SGMS1-205ENST00000498514 NLRP5P59047 1200 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 RPL15P61313 204 aaKnown RBP2.28□□□□□ -2.04
SGMS1-205ENST00000498514 KRT72Q14CN4 511 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 SLC30A9Q6PML9 568 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 C19orf48Q6RUI8 117 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 BEND5Q7L4P6 421 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 TMEM200AQ86VY9 491 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 RASGRP3Q8IV61 690 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 OR4N4Q8N0Y3 316 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 ZCRB1Q8TBF4 217 aaKnown RBP2.28□□□□□ -2.04
SGMS1-205ENST00000498514 GRAPLQ8TC17 118 aaPredicted RBP2.28□□□□□ -2.04
SGMS1-205ENST00000498514 ZNF501Q96CX3 271 aaPredicted RBP2.28□□□□□ -2.04
SGMS1-205ENST00000498514 EBF2Q9HAK2 575 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 FSCN3Q9NQT6 498 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 ZFP57Q9NU63 452 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 SEL1LQ9UBV2 794 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 POU2F3Q9UKI9 436 aa2.28□□□□□ -2.04
SGMS1-205ENST00000498514 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.27□□□□□ -2.05
SGMS1-205ENST00000498514 KIF1CO43896 1103 aaKnown RBP2.27□□□□□ -2.05
SGMS1-205ENST00000498514 CLDN7O95471 211 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 PMS2P2O95744 297 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 ZBED1O96006 694 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 MMP3P08254 477 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 FGF5P12034 268 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 GABRB3P28472 473 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 ALDH4A1P30038 563 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 DHX34Q14147 1143 aaKnown RBP2.27□□□□□ -2.05
SGMS1-205ENST00000498514 CALCRLQ16602 461 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 C5orf22Q49AR2 442 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 NAPEPLDQ6IQ20 393 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 SUSD1Q6UWL2 747 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 NEK10Q6ZWH5 1172 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 PATL1Q86TB9 770 aaKnown RBP2.27□□□□□ -2.05
SGMS1-205ENST00000498514 RFWD2Q8NHY2 731 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 PHKBQ93100 1093 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 MCRS1Q96EZ8 462 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 SLC7A10Q9NS82 523 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 ZIM2Q9NZV7 527 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 RAB21Q9UL25 225 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 CNTN6Q9UQ52 1028 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 PKP3Q9Y446 797 aa2.27□□□□□ -2.05
SGMS1-205ENST00000498514 COPG1Q9Y678 874 aaKnown RBP2.27□□□□□ -2.05
SGMS1-205ENST00000498514 RASA4BC9J798 803 aa2.26□□□□□ -2.05
SGMS1-205ENST00000498514 TPP1O14773 563 aa2.26□□□□□ -2.05
SGMS1-205ENST00000498514 RNMTO43148 476 aaKnown RBP2.26□□□□□ -2.05
SGMS1-205ENST00000498514 IGSF3O75054 1194 aa2.26□□□□□ -2.05
SGMS1-205ENST00000498514 CER1O95813 267 aa2.26□□□□□ -2.05
SGMS1-205ENST00000498514 CH25HO95992 272 aa2.26□□□□□ -2.05
SGMS1-205ENST00000498514 HLA-DQA2P01906 255 aa2.26□□□□□ -2.05
SGMS1-205ENST00000498514 IGHV4-30-4P0DP06 118 aa2.26□□□□□ -2.05
SGMS1-205ENST00000498514 CETPP11597 493 aa2.26□□□□□ -2.05
SGMS1-205ENST00000498514 HOXB9P17482 250 aaPredicted RBP2.26□□□□□ -2.05
SGMS1-205ENST00000498514 FGFR2P21802 821 aa2.26□□□□□ -2.05
SGMS1-205ENST00000498514 PRKCHP24723 683 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms