RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 RHOT1Q8IXI2 618 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 ADGRF2Q8IZF7 708 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 THEM5Q8N1Q8 247 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 RASGEF1CQ8N431 466 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 MMGT1Q8N4V1 131 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 WDTC1Q8N5D0 677 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 ANKRD52Q8NB46 1076 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 C3orf20Q8ND61 904 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 GSTCDQ8NEC7 633 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 SPATA4Q8NEY3 305 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 UBA3Q8TBC4 463 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 COG1Q8WTW3 980 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 RUBCNQ92622 972 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 ZBTB8AQ96BR9 441 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 SENP8Q96LD8 212 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 PSMB7Q99436 277 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 NCAPGQ9BPX3 1015 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 ZSWIM1Q9BR11 485 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 RSRP1Q9BUV0 290 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 ST7Q9NRC1 585 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 TMEM161AQ9NX61 479 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 CDH9Q9ULB4 789 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 TTC7AQ9ULT0 858 aaPredicted RBP5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 PACSIN2Q9UNF0 486 aaPredicted RBP5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 INPP5FQ9Y2H2 1132 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 TSC22D4Q9Y3Q8 395 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 USP15Q9Y4E8 981 aaPredicted RBP5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 PCDHB7Q9Y5E2 793 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 V9GYY5 206 aaPredicted RBP5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 SCN5AQ14524 2016 aa5.53□□□□□ -1.52
HMGXB4-208ENST00000498325 FRYLO94915 3013 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 GOLGA6L10A0A0M3HER8 536 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 FAM170AA1A519 330 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 TARSL2A2RTX5 802 aaKnown RBP5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 CASTOR2A6NHX0 329 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 GOLGA8SH3BPF8 625 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 GABRDO14764 452 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 PSTPIP1O43586 416 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 NBNO60934 754 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 RNF8O76064 485 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 B3GAT3O94766 335 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 ATE1O95260 518 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 ALDH2P05091 517 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 PTPN1P18031 435 aaKnown RBP5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 LMO2P25791 158 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 SSR1P43307 286 aaKnown RBP5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 AARSP49588 968 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 PEX5P50542 639 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 BCAT1P54687 386 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 CORO7P57737 925 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 DMWDQ09019 674 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 BST2Q10589 180 aaKnown RBP5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 PDCLQ13371 301 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 BRD3Q15059 726 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 ELF2Q15723 593 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 PTPN20Q4JDL3 420 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 C2CD6Q53TS8 623 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 CC2D1AQ6P1N0 951 aaPredicted RBP5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 NLRC3Q7RTR2 1065 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 MAATS1Q7Z4T9 603 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 XYLT1Q86Y38 959 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 CCDC105Q8IYK2 499 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 LGI4Q8N135 537 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 C12orf29Q8N999 325 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 B3GALNT2Q8NCR0 500 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 SMRP1Q8NCR6 262 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 KREMEN2Q8NCW0 462 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 DBF4BQ8NFT6 615 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 CCDC26Q8TAB7 109 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 SLC35F5Q8WV83 523 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 KBTBD7Q8WVZ9 684 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 CD101Q93033 1021 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 MCRS1Q96EZ8 462 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 MS4A14Q96JA4 679 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 HSFY1Q96LI6 401 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 RUNDC3BQ96NL0 473 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 HNRNPABQ99729 332 aaKnown RBP5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 MED10Q9BTT4 135 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 COLEC11Q9BWP8 271 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 PHF7Q9BWX1 381 aaPredicted RBP5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 GOLPH3Q9H4A6 298 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 ASNSD1Q9NWL6 643 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 DDX43Q9NXZ2 648 aaKnown RBP5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 DDX56Q9NY93 547 aaKnown RBP5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 HMGXB4Q9UGU5 601 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 CHORDC1Q9UHD1 332 aaPredicted RBP5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 INVSQ9Y283 1065 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 SPTBN2O15020 2390 aa5.52□□□□□ -1.53
HMGXB4-208ENST00000498325 TDRD15B5MCY1 1934 aaKnown RBP5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 TCRBV5S1A1TA0A578 114 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 TMEM189-UBE2V1I3L0A0 370 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 M0QZQ0 153 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 KRIT1O00522 736 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 XPO1O14980 1071 aaKnown RBP5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 GRM6O15303 877 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 TADA2AO75478 443 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 CSPG5O95196 566 aa5.51□□□□□ -1.53
HMGXB4-208ENST00000498325 ZRANB2O95218 330 aaKnown RBP eCLIP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms