RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 PREBQ9HCU5 417 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 DYRK4Q9NR20 520 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 SAMSN1Q9NSI8 373 aaKnown RBP12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 VPS51Q9UID3 782 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 IGF2RP11717 2491 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 PLXNB3Q9ULL4 1909 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 E9PAM4 449 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 F8VZ95 297 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 PRAMEF26H0Y7S4 382 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 TAF4O00268 1085 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 KPNA3O00505 521 aaPredicted RBP12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 ENC1O14682 589 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 WNT9AO14904 365 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 SNAP91O60641 907 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 SRGAP2O75044 1071 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 PRNPP04156 253 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 CAPNS1P04632 268 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 MMEP08473 750 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 CDK4P11802 303 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 CHRNA3P32297 505 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 FKBP15Q5T1M5 1219 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 AGBL4Q5VU57 503 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 NAA35Q5VZE5 725 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 NEK5Q6P3R8 708 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 ZNF783Q6ZMS7 281 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 ARCQ7LC44 396 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 TFAP2DQ7Z6R9 452 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 NOP9Q86U38 636 aaKnown RBP12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 ZNF683Q8IZ20 524 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 TMIEQ8NEW7 156 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 SAP25Q8TEE9 199 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 CPA5Q8WXQ8 436 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 CNDP2Q96KP4 475 aaKnown RBP12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 HAPLN3Q96S86 360 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 PSMB7Q99436 277 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 ANLNQ9NQW6 1124 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 TAB2Q9NYJ8 693 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 MPP6Q9NZW5 540 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 ARHGAP20Q9P2F6 1191 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 RALYQ9UKM9 306 aaKnown RBP12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 PCDHGA1Q9Y5H4 931 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 SNX10Q9Y5X0 201 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 FRYQ5TBA9 3013 aa12.04□□□□□ -0.48
NUDCD3-211ENST00000497978 COL5A1P20908 1838 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 IGLV3-10A0A075B6K4 115 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 A0A0D9SEW6 157 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 FAM170AA1A519 330 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 ILVBLA1L0T0 632 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 CBX4O00257 560 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 RNGTTO60942 597 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 MT-CO1P00395 513 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 C1SP09871 688 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 HOXB3P14651 431 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 RRM1P23921 792 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 EPHA8P29322 1005 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 FLT3P36888 993 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 RXRGP48443 463 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 NOMO3P69849 1222 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 SLC20A2Q08357 652 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 SHBQ15464 509 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 SMAD1Q15797 465 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 ARL13BQ3SXY8 428 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 C2CD6Q53TS8 623 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 RETSATQ6NUM9 610 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 DHRS13Q6UX07 377 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 LINGO4Q6UY18 593 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 EID2Q8N6I1 236 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 OR2A12Q8NGT7 310 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 MDM1Q8TC05 714 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 ENOX1Q8TC92 643 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 EPS8L1Q8TE68 723 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 KLHDC7BQ96G42 594 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 PPP1R16AQ96I34 528 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 CFAP57Q96MR6 1250 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 SPON2Q9BUD6 331 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 ZYG11BQ9C0D3 744 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 IL36AQ9UHA7 158 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 TMEM59LQ9UK28 342 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 LHX6Q9UPM6 363 aa12.03□□□□□ -0.48
NUDCD3-211ENST00000497978 I6L893 689 aaPredicted RBP12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 K7ERQ8 282 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 GFPT2O94808 682 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 CTSLP07711 333 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 HNF1BP35680 557 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 ATP11AP98196 1134 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 CDR2Q01850 454 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 PIP5KL1Q5T9C9 394 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 C22orf39Q6P5X5 142 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 TMPRSS12Q86WS5 348 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 FAM131BQ86XD5 332 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 SPATS2Q86XZ4 545 aaKnown RBP12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 OR7D4Q8NG98 312 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 CEP44Q9C0F1 390 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 VPS16Q9H269 839 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 ATP13A1Q9HD20 1204 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 METTL5Q9NRN9 209 aaKnown RBP12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 TMPRSS4Q9NRS4 437 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 PPARGC1AQ9UBK2 798 aaKnown RBP12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 DKK4Q9UBT3 224 aa12.02□□□□□ -0.49
NUDCD3-211ENST00000497978 DAAM1Q9Y4D1 1078 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms