RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CCDC42Q96M95 316 aa15.7■□□□□ 0.1
NUP50-219ENST00000497960 MCEEQ96PE7 176 aa15.7■□□□□ 0.1
NUP50-219ENST00000497960 PSMB7Q99436 277 aa15.7■□□□□ 0.1
NUP50-219ENST00000497960 CHP1Q99653 195 aa15.7■□□□□ 0.1
NUP50-219ENST00000497960 RAB6CQ9H0N0 254 aa15.7■□□□□ 0.1
NUP50-219ENST00000497960 RETREG1Q9H6L5 497 aa15.7■□□□□ 0.1
NUP50-219ENST00000497960 NHEJ1Q9H9Q4 299 aaPredicted RBP15.7■□□□□ 0.1
NUP50-219ENST00000497960 SERGEFQ9UGK8 458 aa15.7■□□□□ 0.1
NUP50-219ENST00000497960 A0A087X0T9 212 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 TCRBV5S1A1TA0A578 114 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 C1QTNF3-AMACRE9PGA6 284 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 CBX4O00257 560 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 ALOX15BO15296 676 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 BNIP3LO60238 219 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 RTN2O75298 545 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 FAM228BP0C875 321 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 RRM1P23921 792 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 CD27P26842 260 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 ETFBP38117 255 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 CLCN6P51797 869 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 AFF3P51826 1226 aaKnown RBP15.69■□□□□ 0.1
NUP50-219ENST00000497960 GALCP54803 685 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 GRIK2Q13002 908 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 TEAD4Q15561 434 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 RETSATQ6NUM9 610 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 SCYL2Q6P3W7 929 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 NCEH1Q6PIU2 408 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 IL27RAQ6UWB1 636 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 Q6ZVU0 165 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 SLFN11Q7Z7L1 901 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 OR7D4Q8NG98 312 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 OR2T34Q8NGX1 318 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 BIRC7Q96CA5 298 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 ZNF653Q96CK0 615 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 TRIM11Q96F44 468 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 CNPY3Q9BT09 278 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 SLC32A1Q9H598 525 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 ATP13A1Q9HD20 1204 aa15.69■□□□□ 0.1
NUP50-219ENST00000497960 PCNX2A6NKB5 2137 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 DNAH14Q0VDD8 3507 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 MCF2LO15068 1137 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 CCP110O43303 1012 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 ATMINO43313 823 aaPredicted RBP15.68■□□□□ 0.1
NUP50-219ENST00000497960 LRIG2O94898 1065 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 MT-CO1P00395 513 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 GZMAP12544 262 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 SRCP12931 536 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 CEACAM1P13688 526 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 RHOQP17081 205 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 CYLC1P35663 651 aaPredicted RBP15.68■□□□□ 0.1
NUP50-219ENST00000497960 RECQLP46063 649 aaPredicted RBP15.68■□□□□ 0.1
NUP50-219ENST00000497960 MAPKAPK2P49137 400 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 RPL7AP62424 266 aaKnown RBP15.68■□□□□ 0.1
NUP50-219ENST00000497960 GNA12Q03113 381 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 SLC20A2Q08357 652 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 SCAPQ12770 1279 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 SLC18A3Q16572 532 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 EFHC2Q5JST6 749 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 CCDC122Q5T0U0 273 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 N4BP2L1Q5TBK1 243 aaPredicted RBP15.68■□□□□ 0.1
NUP50-219ENST00000497960 MANEALQ5VSG8 457 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 ALKBH5Q6P6C2 394 aaKnown RBP15.68■□□□□ 0.1
NUP50-219ENST00000497960 LINGO4Q6UY18 593 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.68■□□□□ 0.1
NUP50-219ENST00000497960 DNAAF5Q86Y56 855 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 AADATQ8N5Z0 425 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 CCDC185Q8N715 623 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 OR2I1PQ8NGU4 316 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 OR14C36Q8NHC7 312 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 C1orf216Q8TAB5 229 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 TBC1D31Q96DN5 1066 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 OSGEPQ9NPF4 335 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 SPTLC3Q9NUV7 552 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 PARVAQ9NVD7 372 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 DNAAF2Q9NVR5 837 aaKnown RBP15.68■□□□□ 0.1
NUP50-219ENST00000497960 ZNF212Q9UDV6 495 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 PPM1HQ9ULR3 514 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 TPX2Q9ULW0 747 aaKnown RBP15.68■□□□□ 0.1
NUP50-219ENST00000497960 CABIN1Q9Y6J0 2220 aa15.68■□□□□ 0.1
NUP50-219ENST00000497960 UPK3BL1B0FP48 263 aa15.67■□□□□ 0.1
NUP50-219ENST00000497960 UPK3BL2E5RIL1 263 aa15.67■□□□□ 0.1
NUP50-219ENST00000497960 SLC7A4O43246 635 aa15.67■□□□□ 0.1
NUP50-219ENST00000497960 FTLP02792 175 aaPredicted RBP15.67■□□□□ 0.1
NUP50-219ENST00000497960 CSNK1EP49674 416 aaKnown RBP15.67■□□□□ 0.1
NUP50-219ENST00000497960 SEMA3BQ13214 749 aa15.67■□□□□ 0.1
NUP50-219ENST00000497960 SLC14A1Q13336 389 aa15.67■□□□□ 0.1
NUP50-219ENST00000497960 PPP1R15BQ5SWA1 713 aa15.67■□□□□ 0.1
NUP50-219ENST00000497960 ARTNQ5T4W7 220 aa15.67■□□□□ 0.1
NUP50-219ENST00000497960 DEFB124Q8NES8 71 aa15.67■□□□□ 0.1
NUP50-219ENST00000497960 PIP4K2CQ8TBX8 421 aa15.67■□□□□ 0.1
NUP50-219ENST00000497960 BAG1Q99933 345 aaPredicted RBP15.67■□□□□ 0.1
NUP50-219ENST00000497960 TM9SF3Q9HD45 589 aa15.67■□□□□ 0.1
NUP50-219ENST00000497960 TMEM248Q9NWD8 314 aa15.67■□□□□ 0.1
NUP50-219ENST00000497960 DOCK4Q8N1I0 1966 aa15.67■□□□□ 0.1
NUP50-219ENST00000497960 PCDH15Q96QU1 1955 aa15.67■□□□□ 0.1
NUP50-219ENST00000497960 ADAMTS9Q9P2N4 1935 aa15.66■□□□□ 0.1
NUP50-219ENST00000497960 TBC1D3DA0A087WVF3 549 aa15.66■□□□□ 0.1
NUP50-219ENST00000497960 TBC1D3IA0A087WXS9 549 aa15.66■□□□□ 0.1
NUP50-219ENST00000497960 TBC1D3EA0A087X179 549 aa15.66■□□□□ 0.1
NUP50-219ENST00000497960 TBC1D3KA0A087X1G2 549 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms