RNA–Protein interactions for RNA: ENST00000497232.5

CCDC142-209, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-209ENST00000497232 SMAD6O43541 496 aaKnown RBP11.15□□□□□ -0.62
CCDC142-209ENST00000497232 KAT7O95251 611 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 C7P10643 843 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 CR2P20023 1033 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 PTPN3P26045 913 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 CD68P34810 354 aaPredicted RBP11.15□□□□□ -0.62
CCDC142-209ENST00000497232 ETFBP38117 255 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 GRIA2P42262 883 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 NUMBP49757 651 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 C2orf54Q08AI8 447 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 SLC10A7Q0GE19 358 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 CYTH1Q15438 398 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 ALG1LQ6GMV1 187 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 GRAMD4Q6IC98 578 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 BZW1Q7L1Q6 419 aaKnown RBP11.15□□□□□ -0.62
CCDC142-209ENST00000497232 SUGP1Q8IWZ8 645 aaKnown RBP11.15□□□□□ -0.62
CCDC142-209ENST00000497232 CCDC13Q8IYE1 715 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 GJD3Q8N144 294 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 PGBD5Q8N414 524 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 MMGT1Q8N4V1 131 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 ALLCQ8N6M5 410 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 NOA1Q8NC60 698 aaKnown RBP11.15□□□□□ -0.62
CCDC142-209ENST00000497232 FRS2Q8WU20 508 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 TFB1MQ8WVM0 346 aaKnown RBP11.15□□□□□ -0.62
CCDC142-209ENST00000497232 SORCS1Q8WY21 1168 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 ACDQ96AP0 544 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 ZNF599Q96NL3 588 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 NECAB3Q96P71 396 aaPredicted RBP11.15□□□□□ -0.62
CCDC142-209ENST00000497232 PNKPQ96T60 521 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 TMEM121Q9BTD3 319 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 DDX47Q9H0S4 455 aaKnown RBP11.15□□□□□ -0.62
CCDC142-209ENST00000497232 CD248Q9HCU0 757 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 ATP13A1Q9HD20 1204 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 HOMER3Q9NSC5 361 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 ELOVL2Q9NXB9 296 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 WNT16Q9UBV4 365 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 ATP8A1Q9Y2Q0 1164 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 SHROOM3Q8TF72 1996 aa11.15□□□□□ -0.62
CCDC142-209ENST00000497232 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.14□□□□□ -0.63
CCDC142-209ENST00000497232 KCNK1O00180 336 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 PPP1R12AO14974 1030 aaPredicted RBP11.14□□□□□ -0.63
CCDC142-209ENST00000497232 MCF2LO15068 1137 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 TP73O15350 636 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 ATP9BO43861 1147 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 DLDP09622 509 aaKnown RBP11.14□□□□□ -0.63
CCDC142-209ENST00000497232 SRCP12931 536 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 HNRNPLP14866 589 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCDC142-209ENST00000497232 IVDP26440 423 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 CHRNA3P32297 505 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 PAFAH1B1P43034 410 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 TNFRSF4P43489 277 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 SERPINH1P50454 418 aaKnown RBP11.14□□□□□ -0.63
CCDC142-209ENST00000497232 STARD6P59095 220 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 KDSRQ06136 332 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 SNX1Q13596 522 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 CCINQ13939 588 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 HNRNPDQ14103 355 aaKnown RBP11.14□□□□□ -0.63
CCDC142-209ENST00000497232 EIF4HQ15056 248 aaKnown RBP11.14□□□□□ -0.63
CCDC142-209ENST00000497232 INO80DQ53TQ3 878 aaPredicted RBP11.14□□□□□ -0.63
CCDC142-209ENST00000497232 DGKKQ5KSL6 1271 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 PRUNE1Q86TP1 453 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 CDKL3Q8IVW4 592 aaPredicted RBP11.14□□□□□ -0.63
CCDC142-209ENST00000497232 ATPAF2Q8N5M1 289 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 KDM1BQ8NB78 822 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 ATL2Q8NHH9 583 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 CSGALNACT1Q8TDX6 532 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 HTR3CQ8WXA8 447 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 MAGOHBQ96A72 148 aaKnown RBP11.14□□□□□ -0.63
CCDC142-209ENST00000497232 TADA1Q96BN2 335 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 MSANTD3Q96H12 275 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 P2RY13Q9BPV8 354 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 SPON2Q9BUD6 331 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 CARD6Q9BX69 1037 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 MUC3BQ9H195 1237 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 TMEM245Q9H330 911 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 THAP10Q9P2Z0 257 aaPredicted RBP11.14□□□□□ -0.63
CCDC142-209ENST00000497232 LHX3Q9UBR4 397 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 SLCO3A1Q9UIG8 710 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 VPS28Q9UK41 221 aa11.14□□□□□ -0.63
CCDC142-209ENST00000497232 ZSCAN5CA6NGD5 496 aaPredicted RBP11.13□□□□□ -0.63
CCDC142-209ENST00000497232 H7C0C1 242 aa11.13□□□□□ -0.63
CCDC142-209ENST00000497232 CBX4O00257 560 aa11.13□□□□□ -0.63
CCDC142-209ENST00000497232 TIMM44O43615 452 aa11.13□□□□□ -0.63
CCDC142-209ENST00000497232 GCATO75600 419 aa11.13□□□□□ -0.63
CCDC142-209ENST00000497232 EGFP01133 1207 aa11.13□□□□□ -0.63
CCDC142-209ENST00000497232 ASLP04424 464 aa11.13□□□□□ -0.63
CCDC142-209ENST00000497232 MMP2P08253 660 aa11.13□□□□□ -0.63
CCDC142-209ENST00000497232 ZSCAN5DPP0CG00 497 aa11.13□□□□□ -0.63
CCDC142-209ENST00000497232 PYGBP11216 843 aa11.13□□□□□ -0.63
CCDC142-209ENST00000497232 CCNB1P14635 433 aa11.13□□□□□ -0.63
CCDC142-209ENST00000497232 STIP1P31948 543 aaKnown RBP11.13□□□□□ -0.63
CCDC142-209ENST00000497232 RGRP47804 291 aa11.13□□□□□ -0.63
CCDC142-209ENST00000497232 ATP5OP48047 213 aa11.13□□□□□ -0.63
CCDC142-209ENST00000497232 STK19P49842 368 aaPredicted RBP11.13□□□□□ -0.63
CCDC142-209ENST00000497232 ECT2LQ008S8 904 aa11.13□□□□□ -0.63
CCDC142-209ENST00000497232 PRKCQQ04759 706 aa11.13□□□□□ -0.63
CCDC142-209ENST00000497232 CKAP4Q07065 602 aaKnown RBP11.13□□□□□ -0.63
CCDC142-209ENST00000497232 SLC20A2Q08357 652 aa11.13□□□□□ -0.63
CCDC142-209ENST00000497232 RFTN1Q14699 578 aaPredicted RBP11.13□□□□□ -0.63
CCDC142-209ENST00000497232 LBRQ14739 615 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms