RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 SIGLEC16A6NMB1 481 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 KCNK3O14649 394 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 SLC7A4O43246 635 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 PLRG1O43660 514 aaKnown RBP12.67□□□□□ -0.38
CLDN12-213ENST00000496677 SRGAP2O75044 1071 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 CD160O95971 181 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 KRT3P12035 628 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 OR1E1P30953 314 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 SDC4P31431 198 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 TAS2R38P59533 333 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 CNTN1Q12860 1018 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 TEAD4Q15561 434 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 TRIP6Q15654 476 aaKnown RBP12.67□□□□□ -0.38
CLDN12-213ENST00000496677 ANO6Q4KMQ2 910 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 C6orf118Q5T5N4 469 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 AGBL4Q5VU57 503 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 WDR59Q6PJI9 974 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 LINGO4Q6UY18 593 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.67□□□□□ -0.38
CLDN12-213ENST00000496677 RAB44Q7Z6P3 723 aaPredicted RBP12.67□□□□□ -0.38
CLDN12-213ENST00000496677 DSG4Q86SJ6 1040 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 NLRP14Q86W24 1093 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 C3orf20Q8ND61 904 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 OR14C36Q8NHC7 312 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 PIP4K2CQ8TBX8 421 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 PCMTD1Q96MG8 357 aaPredicted RBP12.67□□□□□ -0.38
CLDN12-213ENST00000496677 SLC6A18Q96N87 628 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 FUCA2Q9BTY2 467 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 SCNM1Q9BWG6 230 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 ACE2Q9BYF1 805 aaPredicted RBP12.67□□□□□ -0.38
CLDN12-213ENST00000496677 RETREG1Q9H6L5 497 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 OR12D3Q9UGF7 316 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 TPX2Q9ULW0 747 aaKnown RBP12.67□□□□□ -0.38
CLDN12-213ENST00000496677 PLXNA2O75051 1894 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 CACNA1BQ00975 2339 aa12.67□□□□□ -0.38
CLDN12-213ENST00000496677 CXorf51AA0A1B0GTR3 108 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 H0Y8X5 98 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 HYAL3O43820 417 aaPredicted RBP12.66□□□□□ -0.38
CLDN12-213ENST00000496677 PCDHGA12O60330 932 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 RTN2O75298 545 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 DKK1O94907 266 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 CALB1P05937 261 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 RRM1P23921 792 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 CHRNA3P32297 505 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 NSFP46459 744 aaKnown RBP12.66□□□□□ -0.38
CLDN12-213ENST00000496677 PPP2CBP62714 309 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 PPP2CAP67775 309 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 ARF5P84085 180 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 GNA12Q03113 381 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 SLC20A2Q08357 652 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 SCAPQ12770 1279 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 IQCB1Q15051 598 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 PIP5KL1Q5T9C9 394 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 FAM46CQ5VWP2 391 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 ACAD10Q6JQN1 1059 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 CCDC185Q8N715 623 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 ATP11CQ8NB49 1132 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 TMIEQ8NEW7 156 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 GATA6Q92908 595 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 NTAN1Q96AB6 310 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 VOPP1Q96AW1 172 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 NDFIP2Q9NV92 336 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 MYO6Q9UM54 1294 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 BTBD3Q9Y2F9 522 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 CHD5Q8TDI0 1954 aa12.66□□□□□ -0.38
CLDN12-213ENST00000496677 TBC1D3DA0A087WVF3 549 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 TBC1D3IA0A087WXS9 549 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 TBC1D3EA0A087X179 549 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 TBC1D3KA0A087X1G2 549 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 TBC1D3FA6NER0 549 aaPredicted RBP12.65□□□□□ -0.38
CLDN12-213ENST00000496677 TBC1D3LB9A6J9 549 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 TRIM16O95361 564 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 PROS1P07225 676 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 PLEKP08567 350 aaPredicted RBP12.65□□□□□ -0.38
CLDN12-213ENST00000496677 TBC1D3HP0C7X1 549 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 FERP16591 822 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 RHOQP17081 205 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 GPD1P21695 349 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 CD38P28907 300 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 RPL7AP62424 266 aaKnown RBP12.65□□□□□ -0.38
CLDN12-213ENST00000496677 SHBQ15464 509 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 CDO1Q16878 200 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 ARL13BQ3SXY8 428 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 TBC1D3GQ6DHY5 549 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 TBC1D3CQ6IPX1 549 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 SLCO6A1Q86UG4 719 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 TRIM69Q86WT6 500 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 MCOLN2Q8IZK6 566 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 TBC1D3Q8IZP1 549 aaPredicted RBP12.65□□□□□ -0.38
CLDN12-213ENST00000496677 CHST14Q8NCH0 376 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 FAM172AQ8WUF8 416 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 ARRDC3Q96B67 414 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 NAP1L5Q96NT1 182 aaPredicted RBP12.65□□□□□ -0.38
CLDN12-213ENST00000496677 SPON2Q9BUD6 331 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 CEP44Q9C0F1 390 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 NAT10Q9H0A0 1025 aaKnown RBP12.65□□□□□ -0.38
CLDN12-213ENST00000496677 TMEM248Q9NWD8 314 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 TOR4AQ9NXH8 423 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 TAS2R14Q9NYV8 317 aa12.65□□□□□ -0.38
CLDN12-213ENST00000496677 NEUROG3Q9Y4Z2 214 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms