RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 FNDC1Q4ZHG4 1894 aaPredicted RBP8.79□□□□□ -1
U2AF1-212ENST00000496462 LOC730098B7Z3J9 87 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 ENC1O14682 589 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 GNSP15586 552 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 GGCXP38435 758 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 SUOXP51687 545 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 ZXDAP98168 799 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 SNX1Q13596 522 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 HNRNPDQ14103 355 aaKnown RBP8.79□□□□□ -1
U2AF1-212ENST00000496462 TEAD4Q15561 434 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 CARD16Q5EG05 197 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 DPY19L2P1Q6NXN4 242 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 RHBDF2Q6PJF5 856 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 CXorf40AQ8TE69 158 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 PKNOX2Q96KN3 472 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 ZDHHC6Q9H6R6 413 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 CWC15Q9P013 229 aaKnown RBP8.79□□□□□ -1
U2AF1-212ENST00000496462 HACD3Q9P035 362 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 PYCARDQ9ULZ3 195 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 HCN4Q9Y3Q4 1203 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 CACNA1HO95180 2353 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 DRGXA6NNA5 263 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 COL19A1Q14993 1142 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 DLG2Q15700 870 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 CCNG2Q16589 344 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 INO80DQ53TQ3 878 aaPredicted RBP8.79□□□□□ -1
U2AF1-212ENST00000496462 DNAAF5Q86Y56 855 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 UMODL1-AS1Q8N2C9 162 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 HTR3CQ8WXA8 447 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 NT5C3BQ969T7 300 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 FEM1CQ96JP0 617 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 OSER1Q9NX31 292 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 SUSD2Q9UGT4 822 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 CCL26Q9Y258 94 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 SLC27A6Q9Y2P4 619 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 TMEM221A6NGB7 291 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 ERI2A8K979 691 aaKnown RBP8.79□□□□□ -1
U2AF1-212ENST00000496462 M0R296 226 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 KDELR3O43731 214 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 OTUD4Q01804 1114 aaKnown RBP8.79□□□□□ -1
U2AF1-212ENST00000496462 CAV1Q03135 178 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 LMAN2Q12907 356 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 GTF2H3Q13889 308 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 LLGL1Q15334 1064 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 WDR45BQ5MNZ6 344 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 TRIM67Q6ZTA4 783 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 OR7D4Q8NG98 312 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 SNX19Q92543 992 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 TSNARE1Q96NA8 513 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 FAM83CQ9BQN1 747 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 GPR63Q9BZJ6 419 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 CCDC68Q9H2F9 335 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 LTB4R2Q9NPC1 389 aa8.79□□□□□ -1
U2AF1-212ENST00000496462 HECAQ9UBI9 543 aaPredicted RBP8.79□□□□□ -1
U2AF1-212ENST00000496462 RHOBTB1O94844 696 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 PAPOLAP51003 745 aaKnown RBP8.78□□□□□ -1
U2AF1-212ENST00000496462 PEX6Q13608 980 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 DHX34Q14147 1143 aaKnown RBP8.78□□□□□ -1
U2AF1-212ENST00000496462 DPYSL3Q14195 570 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 CCDC33Q8N5R6 958 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 ACTL9Q8TC94 416 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 EDAQ92838 391 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 VPS45Q9NRW7 570 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 GMEB2Q9UKD1 530 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 ARIH1Q9Y4X5 557 aaPredicted RBP8.78□□□□□ -1
U2AF1-212ENST00000496462 C5orf42Q9H799 3197 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 SPTBN5Q9NRC6 3674 aaKnown RBP8.78□□□□□ -1
U2AF1-212ENST00000496462 FAM187AA6NFU0 413 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 WASH4PA8MWX3 477 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 ALOX15BO15296 676 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 IGLV3-27P01718 113 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 CCNB1P14635 433 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 NUDT1P36639 197 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 WASP42768 502 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 FNTAP49354 379 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 TAS2R40P59535 323 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 ZNF284Q2VY69 593 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 IFT20Q8IY31 132 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 SPEM1Q8N4L4 309 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.78□□□□□ -1
U2AF1-212ENST00000496462 CAMKK1Q8N5S9 505 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 GDAP1Q8TB36 358 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 HMGB4Q8WW32 186 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 KHSRPQ92945 711 aaKnown RBP eCLIP8.78□□□□□ -1
U2AF1-212ENST00000496462 PIWIL1Q96J94 861 aaKnown RBP8.78□□□□□ -1
U2AF1-212ENST00000496462 FEM1AQ9BSK4 669 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 TMEM30AQ9NV96 361 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 FAM153AQ9UHL3 310 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 PKP3Q9Y446 797 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 hCG_1818297A0A087WSY0 165 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 CFAP99D6REC4 459 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 GSRP00390 522 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 PENKP01210 267 aaPredicted RBP8.78□□□□□ -1
U2AF1-212ENST00000496462 PYGLP06737 847 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 CLCN5P51795 746 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 NUBP1P53384 320 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 PDIK1LQ8N165 341 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 FBXL6Q8N531 539 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 OR2T3Q8NH03 318 aa8.78□□□□□ -1
U2AF1-212ENST00000496462 FOXJ1Q92949 421 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms